Search Results:　 1-20 of 1424

1

Dual Presence of Anaplasma phagocytophilum and Its Closely Related Anaplasma sp. in Ixodid Ticks in Hokkaido, Japan, and Their Specific Molecular Detection

YBANEZ Adrian Patalinghug , MATSUMOTO Kotaro , KISHIMOTO Toshio [他]

The journal of veterinary medical science 74(12), 1551-1560, 2012-12-00
2

Low Bacterial Diversity and High Labile Organic Matter Concentrations in the Sediments of the Medee Deep-Sea Hypersaline Anoxic Basin

AKOUMIANAKI IOANNA , NOMAKI HIDETAKA , PACHIADAKI MARIA [他]

Microbes and Environments 27(4), 504-508, 2012-12-00
3

Aeromonas hydrophila subsp. dhakensis Isolated from Feces, Water and Fish in Mediterranean Spain

ESTEVE CONSUELO , ALCAIDE ELENA , BLASCO MARIA DOLORES

Microbes and Environments 27(4), 367-373, 2012-12-00
4

First Record of Orobdella tsushimensis (Hirudinida: Arhynchobdellida: Orobdellidae) from Korea (Gageodo Island) and its Molecular Phylogenetic Position within the Genus

Nakano Takafumi , Seo Hong-Yul

… Phylogenetic analyses using mitochondrial COI, tRNA^<Cys>, tRNA^<Met>, 12S rRNA, tRNA^<Val>, and 16S rRNA markers show that the specimen from Gageodo Island and those identified as O. …

Species diversity : an international journal for taxonomy, systematics, speciation, biogeography, and life history research of animals 17(2), 235-240, 2012-11-25

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5

DGGE and PFGE analysis of lactic acid bacterial succession during Kimoto making [in Japanese]

Masuda Yasuyuki , Noguchi Tomoko , Takahashi Toshinari , Iguchi Atsushi , Osawa Ro , Mizoguchi Haruhiko

清酒醸造における伝統的な酒母(生〓)の乳酸菌叢の解析を,平成10酒造年度にPCR-DGGE法を用いて試み,L. mesenteroidesとL. sakeiが優占菌であるという従来の知見を再確認した.しかし,ワイン発酵における乳酸菌叢解析のためのプライマーセットを用いたところ,原料の蒸米に由来するDNAが非標的配列の増幅をもたらした.清酒醸造の工程管理に適用するためには,PCR条件やプライマー設計 …

Seibutsu-kogaku Kaishi 90(11), 684-690, 2012-11-25

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6

Anaerobic treatment of municipal wastewater at ambient temperature: Analysis of archaeal community structure and recovery of dissolved methane

Bandara Wasala M.K.R.T.W. , Kindaichi Tomonori , Satoh Hisashi , Sasakawa Manabu , Nakahara Yoshihito , Takahashi Masahiro , Okabe Satoshi

… Analysis of the archaeal community structures of the granular sludge from the UASB using 16S rRNA gene-cloning indicated that after microorganisms had adapted to low temperatures, the archaeal community had a lower diversity and the relative abundance of acetoclastic methanogens decreased together with an increase in hydrogenotrophic methanogens. …

Water Research 46(17), 5756-5764, 2012-11-01

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7

A simple method to identify Hediste sibling species (Polychaeta: Nereididae) using multiplex PCR amplification of the mitochondrial 16S rRNA gene

TOSUJI HIROAKI , SATO MASANORI

Plankton & benthos research : a joint journal of the Plankton Society of Japan & the Japanese Association of Benthology 7(4), 195-202, 2012-11-00
8

The first assessment of cyanobacterial and diazotrophic diversities in the Japan Sea

Hashimoto Ryoya , Yoshida Takashi , Kuno Sotaro [他] , Nishikawa Tetsuya , Sako Yoshihiko

… The diversity of cyanobacteria and diazotrophs in the Japan Sea was investigated by analyzing sequences of cyanobacterial 16S rRNA genes and nitrogen fixation genes (nifH) from seawater sampled at depths ranging from the surface to 100 m at two stations. … Of the 107 cyanobacterial 16S rRNA gene sequences obtained, 97 and three sequences were assigned to Synechococcus sub-cluster 5.1 and Prochlorococcus HL (II), respectively. …

Fisheries science 78(6), 1293-1300, 2012-11-00

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9

Distribution and role of Coprothermobacter spp. in anaerobic digesters(ENVIRONMENTAL BIOTECHNOLOGY)

Tandishabo Kalayi , Nakamura Kohei , Umetsu Kazutaka , Takamizawa Kazuhiro

… was investigated in seven anaerobic digesters using 16S rRNA gene-based quantitative PCR. …

Journal of bioscience and bioengineering 114(5), 518-520, 2012-11-00

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10

O_2-stable membrane-bound [NiFe]hydrogenase from a newly isolated Citrobacter sp. S-77(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)

Eguchi Shigenobu , Yoon Ki-Seok , Ogo Seiji

… According to the 16S rRNA gene sequence and phylogenetic analysis of the strain S-77, it belongs to the genus of Citrobacter. …

Journal of bioscience and bioengineering 114(5), 479-484, 2012-11-00

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11

Temperature dependence for anammox bacteria enriched from freshwater sediments

Osaka Toshifumi , Kimura Yuya , Otsubo Yosuke [他]

Journal of bioscience and bioengineering 114(4), 429434, 2012-10-00
12

Antibacterial Activity of 4-Oxo-(E)-2-hexenal from Adults and Nymphs of the Heteropteran, Dolycoris baccarum (Heteroptera: Pentatomidae)

NOGE Koji , KIMURA Hiroki , ABE Makoto [他]

Bioscience, Biotechnology, and Biochemistry 76(10), 1975-1978, 2012-10-00
13

Temperature dependence for anammox bacteria enriched from freshwater sediments(ENVIRONMENTAL BIOTECHNOLOGY)

Osaka Toshifumi , Kimura Yuya , Otsubo Yosuke , Suwa Yuichi , Tsuneda Satoshi , Isaka Kazuichi

… Phylogenetic analysis based on 16S rRNA gene from enrichment cultures revealed the presence of various anammox bacteria affiliated with unknown anammox bacteria as well as known anammox candidates, i.e., Candidatus Kuenenia stuttgartiensis and Candidatus Brocadia fulgida, Candidatus Scalindua wagneri. …

Journal of bioscience and bioengineering 114(4), 429-434, 2012-10-00

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14

A Case of Pulmonary Nocardiosis Caused by Nocardia abscessus Diagnosed by 16S Ribosomal RNA Gene Sequencing Analysis of Bronchial Washing Specimen [in Japanese]

Hara Kanako , Ogoshi Takaaki , Yatera Kazuhiro , Tokuyama Susumu , Chojin Yasuo , Yamasaki Kei , Kawanami Toshinori , Ishimoto Hiroshi , Yoshii Chiharu , Mukae Hiroshi

… 2010年3月の胸部CTで両肺にびまん性に小葉中心性の粒状影を認めた.また,右上葉,左下葉に空洞影,右中葉に気管支拡張病変の増悪を認め,喀血が出現したため,気管支鏡検査を施行した.気管支鏡検査による気道分泌物の16S rRNA遺伝子配列の検索によりNocardia abscessusによる肺ノカルジア症と診断し, meropenemおよびsulfamethoxazole-trimethoprim合剤による抗菌薬治療で改善した.結論. …

The journal of the Japan Society for Bronchology 34(5), 428-432, 2012-09-25

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15

A simple method to collect digestive fluid for monitoring digestive enzyme activities and gut microbes of the abalone Haliotis discus discus [in Japanese]

NIWA KENTARO , AONO HIDEAKI , SAWABE TOMOO

アワビ消化液の非致死的な消化管内容液（DF）の採取方法を開発した。この方法により採取した DF と解剖により採取した消化盲嚢ホモジネート（DH）との間で多糖類分解酵素活性と細菌叢を比較した結果，DF のアルギン酸リアーゼ，セルラーゼおよび β-1,4-マンナナーゼの比活性は DH のそれらに比べていずれも高いこと，また，DF の生菌数は DH よりも低い値を示すが，細菌種の組成は類似していることが …

NIPPON SUISAN GAKKAISHI 78(5), 951-957, 2012-09-15

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16

Effects of Spices Essential Oils on the Spoilage-Related Microbiota in Chilled Pork Stored in Antimicrobial Pack

LIU Guo-Qing , ZHANG Li-Li , ZONG Kai , WANG Ai-Min , YU Xiao-Feng

Food science and technology research 18(5), 695-704, 2012-09-01

References (39)
17

Carbonate-Dissolving Bacteria from 'Miliolite', a Bioclastic Limestone, from Gopnath, Gujarat, Western India

SUBRAHMANYAM GANGAVARAPU , VAGHELA RAVI , BHATT NILESH PINAKINPRASAD , ARCHANA GATTUPALLI

… Then, 16S rRNA sequence analysis helped to decipher that the majority of carbonate-dissolving bacteria were affiliated to phyla Firmicutes (Families Bacillaceae and Staphylococcaceae) and Actinobacteria (Family Promicromonosporaceae) indicating their role in miliolite weathering. …

Microbes and Environments 27(3), 334-337, 2012-09-01

J-STAGE CrossRef References (37)
18

Diversity and Distribution of N-Acylhomoserine Lactone (AHL)-Degrading Activity and AHL-Lactonase (AiiM) in Genus Microbacterium

WANG WEN-ZHAO , MOROHOSHI TOMOHIRO , SOMEYA NOBUTAKA , IKEDA TSUKASA

… The similarity of the chromosomal locus of the aiiM gene is associated with the phylogenetic classification based on 16S rRNA. …

Microbes and Environments 27(3), 330-333, 2012-09-01

J-STAGE CrossRef References (15)
19

Detection of Anammox Activity and 16S rRNA Genes in Ravine Paddy Field Soil

SATO YOSHINORI , OHTA HIROYUKI , YAMAGISHI TAKAO , GUO YONG , NISHIZAWA TOMOYASU , RAHMAN M. HABIBUR , KURODA HISAO , KATO TASK , SAITO MASANORI , YOSHINAGA IKUO , INUBUSHI KAZUYUKI , SUWA YUICHI

An anammox assay involving a 15N tracer and gas chromatography-mass spectrometry revealed that the potential anammox activity accounted for 1 to 5% of total N2 production in a ravine paddy field, Japa …

Microbes and Environments 27(3), 316-319, 2012-09-01

J-STAGE CrossRef References (15)
20

Production and Consumption of Hydrogen in Hot Spring Microbial Mats Dominated by a Filamentous Anoxygenic Photosynthetic Bacterium

OTAKI HIROYO , EVERROAD R. CRAIG , MATSUURA KATSUMI , HARUTA SHIN

… Clone library analysis of 16S rRNA genes amplified from the mats indicated the existence of several species of hydrogen-producing fermentative bacteria. …

Microbes and Environments 27(3), 293-299, 2012-09-01

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