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1

Development of a strain for efficient degradation of polychlorinated biphenyls by patchwork assembly of degradation pathways(ENVIRONMENTAL BIOTECHNOLOGY)

Ohmori Tsuneo , Morita Hirokazu , Tanaka Megumi , Miyauchi Keisuke , Kasai Daisuke , Furukawa Kensuke , Miyashita Kiyotaka , Ogawa Naoto , Masai Eiji , Fukuda Masao

… The resulting recombinant strain exhibited no biphenyl 2,3-dioxygenase (BphA) activity encoded by bphAaAbAcAd genes, which encode the large and small subunits of the terminal oxygenase component and the ferredoxin and reductase subunits responsible for electron transfer from NADH to the large subunit. … To obtain the BphA activity of RHA1 in NK8, sets of BphA genes were constructed by combining the bphAaAbAcAd genes of RHA1 and bphA3A4 of Pseudomonas pseudoalcaligenes KF707, encoding the ferredoxin and reductase subunits. …

Journal of bioscience and bioengineering 111(4), 437-442, 2011-04

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2

Permeabilization induced by lipid II-targeting lantibiotic nisin and its effect on the bioconversion of vitamin D3 to 25-hydroxyvitamin D3 by Rhodococcus erythropolis

Imoto Noriko , Nishioka Taiki , Tamura Tomohiro

… The degradation rate of the [2Fe-2S] cluster of ferredoxin ThcC from R. …

Biochemical and Biophysical Research Communications 405(3), 393-398, 2011-02-18

IR CrossRef
3

Expression in Escherichia coli of Biphenyl 2,3-Dioxygenase Genes from a Gram-Positive Polychlorinated Biphenyl Degrader, Rhodococcus jostii RHA1

OHMORI Tsueno , MORITA Hirokazu , TANAKA Megumi , TOMOI Masanori , MIYAUCHI Keisuke , KASAI Daisuke , FURUKAWA Kensuke , MASAI Eiji , FUKUDA Masao

… Multi-component biphenyl 2,3-dioxygenase (BphA) genes of RHA1 encode large and small subunits of oxygenase component and ferredoxin and reductase components. … coli, hybrid BphA gene derivatives were constructed by replacing ferredoxin and/or reductase component genes of RHA1 with those of Pseudomonas pseudoalcaligenes KF707. … The results obtained indicate a lack of catalytic activity of the RHA1 ferredoxin component gene, bphAc in E. …

Bioscience, Biotechnology, and Biochemistry 75(1), 26-33, 2011-01-23

J-STAGE CrossRef References (42)
4

Detecting weak protein-protein interactions by modified far-western blotting

Sato Yuya , Kameya Masafumi , Arai Hiroyuki [他]

Journal of bioscience and bioengineering 112(3), 304-307, 2011-09
5

A New Method to Evaluate the Unfolding Activity of Chaperone Unit ClpA Based on Fe–S Cluster Disruption

Ohgita Takashi , Okuno Takashi , Hama Susumu , Tsuchiya Hiroyuki , Kogure Kentaro

… coli Ferredoxin (Fd) was used as a new model substrate for ClpAP to evaluate its unfolding activity. …

CHEMICAL & PHARMACEUTICAL BULLETIN 59(5), 657-661, 2011

J-STAGE CrossRef
6

Arabidopsis CFD is an ortholog of Chlamydomonas Ccs1 that is required for c-type heme assembly in chloroplasts

TAKAMI Tsuneaki , KOBAYASHI Yoshichika , SHIKANAI Toshiharu

… In vitro ferredoxin-dependent plastoquinone reduction activity was not affected in cfd, suggesting that system II c-type Cyt biogenesis is required for the machinery of photosystem I cyclic electron transport. …

Plant Biotechnology 27(5), 401-408, 2010-12-25

J-STAGE CrossRef References (35)
7

2P343 Crystal growth of PcyA, a ferredoxin-dependent billin reductase, for neutron crystallographic analysis(The 48th Annual Meeting of the Biophysical Society of Japan)

Ishikawa Kumiko , Hagiwara Yoshinori , Wada Kei , Obara Yuji , Kuroki Ryota , Tamada Taro , Fukuyama Keiichi , Unno Masaki

Biophysics 50(SUPPLEMENT_2), S143, 2010-08-15

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8

2P020 The analyses of the folding mechanism of the Ferredoxin-like folds based on renewed inter-residue average distance statistics(The 48th Annual Meeting of the Biophysical Society of Japan)

Matsuoka Masanari , Kikuchi Takeshi

Biophysics 50(SUPPLEMENT_2), S85, 2010-08-15

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9

Involvement of AtNAP1 in the regulation of chlorophyll degradation in Arabidopsis thaliana

Nagane Tomohiro , Tanaka Ayumi , Tanaka Ryouichi

… HAR and PaO use ferredoxin as a reducing power and PaO has an iron-sulfur center; … however, there were no distinct differences in the protein levels of ferredoxin and PaO between wild type and hmc1. …

Planta 231(4), 939-949, 2010-03

IR CrossRef
10

Iron Deficiency in Micro-Sized Diatoms in the Oyashio Region of the Western Subarctic Pacific during Spring

HATTORI SAITO AI , NISHIOKA JUN , ONO TSUNEO , MCKAY R. MICHAEL L. , SUZUKI KOJI

Journal of oceanography 66(1), 105-115, 2010-02-01

References (54) Cited by (1)
11

Electrochemistry of Biologically Related Metal Complexes and Its Applications

Taniguchi Isao

… The main achievements are: 1) the developments of functional electrodes for the direct rapid electron-transfer of metalloproteins, such as cytochrome c, myoglobin and ferredoxin, and their applications to analyze the biological functions of the metalloproteins using usual electrochemical techniques. … 2) Biological functions of key amino-acids of myoglobin and ferredoxin have also been studied by comparing electrochemical behavior with those of mutated molecules. …

Bulletin of Japan Society of Coordination Chemistry 55(0), 19-30, 2010

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12

Crystallization and preliminary X-ray studies of ferredoxin-NADP + oxidoreductase encoded by Bacillus subtilis yumC

Komori Hirofumi , Seo Daisuke , Sakurai Takeshi , Higuchi Yoshiki

… Ferredoxin-NADP+ oxidoreductase encoded by Bacillus subtilis yumC has been purified and successfully crystallized in complex with NADP + in two forms. …

Acta Crystallographica Section F: Structural Biology and Crystallization Communications 66(3), 301-303, 2010

IR CrossRef
13

Guanidine Hydrochloride- and Urea-Induced Unfolding of Toxoplasma gondii Ferredoxin-NADP^+ Reductase : Stabilization of a Functionally Inactive Holo-Intermediate

SINGH Kulwant , BHAKUNI Vinod

Journal of Biochemistry 145(6), 721-731, 2009-06-01

References (40)
14

In Vitro and In Vivo Interactions of Ferredoxin-NADP^+ Reductases in Pseudomonas putida

YEOM Jinki , JEON Che Ok , MADSEN Eugene L. , PARK Woojun

Journal of Biochemistry 145(4), 481-491, 2009-04-01

References (37)
15

Studies of interaction of homo-dimeric ferredoxin-NAD(P)+ oxidoreductases of Bacillus subtilis and Rhodopseudomonas palustris, that are closely related to thioredoxin reductases in amino acid sequence, with ferredoxins and pyridine nucleotide coenzymes

Seo Daisuke , Okabe Seisuke , Yanase Mitsuhiro , Kataoka Kunishige , Sakurai Takeshi

… Ferredoxin-NADP+ oxidoreductases (FNRs) of Bacillus subtilis (YumC) and Rhodopseudomonas palustris CGA009 (RPA3954) belong to a novel homo-dimeric type of FNR with high amino acid sequence homology to NADPH-thioredoxin reductases. …

Biochimica et Biophysica Acta - Proteins and Proteomics 1794(4), 594-601, 2009-04

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16

SF-002-4 Ferredoxin Reductaseによる抗癌剤感受性増強のメカニズム(固形がん治療,サージカルフォーラム,第109回日本外科学会定期学術集会) [in Japanese]

奥村浩 , 夏越祥次 , 森正樹 , Huebner Kay , M.Croce Carlo

Journal of Japan Surgical Society 110(臨時増刊号_2), 226, 2009-02-25

CiNii Fulltext PDF - Open Access Ichushi Web
17

Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type Ferredoxin [in Japanese]

SENDA Miki , KIMURA Shigenobu , FUKUDA Masao , ISHIDA Tetsuo , SENDA Toshiya

… BphA4 and BphA3 are, respectively, an FAD-containing NADH-dependent ferredoxin reductase and a Rieske-type [2Fe-2S] ferredoxin of a biphenyl dioxygenase BphA derived from <I>Acidovorax</I> …

Nihon Kessho Gakkaishi 50(6), 341-347, 2009-01-20

Journal@rchive References (19)
18

The Expression Pattern of NAD (P) H Oxidases and the Cyclic Electron Transport Pathway around Photosystem I of Synechocystis sp. PCC6803 Depend on Growth Conditions

OOYABU Junko , OHTSUKA Masako , KASHINO Yasuhiro , KOIKE Hiroyuki , SATOH Kazuhiko

… Activity staining and inhibitor data suggested that the ferredoxin-quinone reductase (FQR) route is the main pathway in ycf33-deletion and high-light (300 μE m−2 s−1)-grown cells as well as in M55 cells. … In high-salt (0.55 M NaCl)-grown cells, the amount of ferredoxin-NADP+ oxidoreductase (FNR) increased, and the main cyclic electron flow was perhaps the FNR route. …

Bioscience, Biotechnology, and Biochemistry 72(12), 3180-3188, 2008-12-23

J-STAGE CrossRef References (25)
19

2P-068 Dynamics of amino acids in the electron transfer pathways between Oxygenase and Ferredoxin components in Rieske oxygenase system(The 46th Annual Meeting of the Biophysical Society of Japan)

Dawson Wayne , Terada Tohru , Shimizu Kentaro

Biophysics 48(SUPPLEMENT_1), S85, 2008-10-25

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20

1P-023 Crystal structure of the ferredoxin reductase component in the Rieske non-heme iron oxygenase system, carbazole 1, 9a-dioxygenase(The 46th Annual Meeting of the Biophysical Society of Japan)

Ashikawa Yuji , Fujimoto Zui , Usami Yusuke , Inoue Kengo , Uchimura Hiromasa , Noguchi Haruko , Yamane Hisakazu , Nojiri Hideaki

Biophysics 48(SUPPLEMENT_1), S24, 2008-10-25

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Related Authors

Related Journals

Biophysics
Bioscience, Biotechnology, and Biochemistry
Journal of Biochemistry
Journal of bioscience and bioengineering
Acta Crystallographica Section F: Structural Biology and Crystallization Communications
Biochemical and Biophysical Research Communications
Biochimica et Biophysica Acta - Proteins and Proteomics
Bulletin of Japan Society of Coordination Chemistry
CHEMICAL & PHARMACEUTICAL BULLETIN
Journal of Japan Surgical Society
Journal of oceanography
Nihon Kessho Gakkaishi
Plant Biotechnology
Planta

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