Structural and mechanistic roles of three consecutive Pro residues of porcine NADH-cytochrome b_5 reductase for the binding of β-NADH(ENZYMOLOGY, PROTEIN ENGINEERING, AND ENZYME TECHNOLOGY)

    • Nishimura Yuka
    • Department of Molecular Science and Material Engineering, Graduate School of Science and Technology, Kobe University
    • Shibuya Maiko
    • Department of Molecular Science and Material Engineering, Graduate School of Science and Technology, Kobe University
    • Muraki Aya
    • Department of Chemistry, Graduate School of Science, Kobe University
    • Takeuchi Fusako
    • Department of Chemistry, Graduate School of Science, Kobe University:Department of Pharmacy, College of Pharmaceutical Sciences, Ritsumeikan University

    • Park Sam-Yong
    • Division of Science of Biological Supramolecular Systems, Graduate School of Integrated Science, Yokohama City University

抄録

Well-conserved three consecutive Pro residues (Pro247-249) in the NADH-binding subdomain of NADH-cytochrome b_5 reductase were proposed to form a basal part of the NADH-binding site. To investigate the structural and mechanistic roles of these residues, we expressed site-directed mutants for a soluble domain of the porcine enzyme where each of the residues was replaced with either Ala or Leu residue, respectively, using a heterologous expression system in Escherichia coll. Six mutants (P247A, P247L, P248A, P248L, P249A, and P249L) were produced as a fusion protein containing a 6×His-tag sequence at the NH_2-terminus and were purified to homogeneity with a stoichiometric amount of bound FAD. Mutations were each confirmed for the purified proteins by MALDI-TOF mass spectrometry. Steady-state kinetic analyses for NADH: ferricyanide reductase and NADH: cytochrome b_5 reductase acitivities were conducted for all the mutants. Substitution of Pro247 with Leu residue was found to significantly decrease k_<cat> with slight increase in K_m for the physiological electron donor NADH. However, K_m values for the electron acceptors (both cytochrome b_5 and ferricyanide) of P247L were found to be decreased significantly. Such changes were not observed for P247A or other four mutants. These results suggested that Pro247 among the three consecutive Pro residues has the most important role for the formation of a binding site cavity and that only a slight change in the side-chain volume at this residue from Ala to Leu residue affected the electron transfer reaction from NADH and, further, on the recognition of ferricytochrome b_5.

収録刊行物

Journal of bioscience and bioengineering   [巻号一覧]

Journal of bioscience and bioengineering 108(4), 286-292, 2009-10  [この号の目次]

公益社団法人日本生物工学会

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各種コード

  • NII論文ID(NAID) :
    110007465821
  • NII書誌ID(NCID) :
    AA11307678
  • 本文言語コード :
    ENG
  • 資料種別 :
    ART
  • ISSN :
    13891723
  • NDL 記事登録ID :
    10404314
  • NDL 雑誌分類 :
    ZP15(科学技術--化学・化学工業--醗酵・微生物工学)
  • NDL 請求記号 :
    Z53-S65
  • 収録DB :
    CJP書誌  NDL  NII-ELS