Sugars and Circadian Regulation Make Major Contributions to the Global Regulation of Diurnal Gene Expression in <i>Arabidopsis</i>

DOI PDF 被引用文献29件
  • Oliver E. Bläsing
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Yves Gibon
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Manuela Günther
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Melanie Höhne
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Rosa Morcuende
    Instituto de Recursos Naturales y Agrobiologia de Salamanca  Consejo Superior de Investigaciones Cientificas  37008 Salamanca  Spain
  • Daniel Osuna
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Oliver Thimm
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Björn Usadel
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Wolf-Rüdiger Scheible
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany
  • Mark Stitt
    Max Planck Institute of Molecular Plant Physiology  D-14476 Potsdam-Golm  Germany

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<jats:title>Abstract</jats:title> <jats:p>The diurnal cycle strongly influences many plant metabolic and physiological processes. Arabidopsis thaliana rosettes were harvested six times during 12-h-light/12-h-dark treatments to investigate changes in gene expression using ATH1 arrays. Diagnostic gene sets were identified from published or in-house expression profiles of the response to light, sugar, nitrogen, and water deficit in seedlings and 4 h of darkness or illumination at ambient or compensation point [CO2]. Many sugar-responsive genes showed large diurnal expression changes, whose timing matched that of the diurnal changes of sugars. A set of circadian-regulated genes also showed large diurnal changes in expression. Comparison of published results from a free-running cycle with the diurnal changes in Columbia-0 (Col-0) and the starchless phosphoglucomutase (pgm) mutant indicated that sugars modify the expression of up to half of the clock-regulated genes. Principle component analysis identified genes that make large contributions to diurnal changes and confirmed that sugar and circadian regulation are the major inputs in Col-0 but that sugars dominate the response in pgm. Most of the changes in pgm are triggered by low sugar levels during the night rather than high levels in the light, highlighting the importance of responses to low sugar in diurnal gene regulation. We identified a set of candidate regulatory genes that show robust responses to alterations in sugar levels and change markedly during the diurnal cycle.</jats:p>

収録刊行物

  • The Plant Cell

    The Plant Cell 17 (12), 3257-3281, 2005-11-18

    Oxford University Press (OUP)

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