The efficiency of entropy evolution rate for construction of phylogenetic trees

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抄録

The entropy evolution rate introduced by Ohya (Ohya, 1989) is one of the measures to classify gene sequences such as DNA sequences or amino acid sequences and to construct phylogenetic trees. The efficiency of this measure for the construction of phylogenetic trees with DNA sequences is examined in this paper. Taking model trees with branches of given evolutionary rates, we generated sequences with 1000 nucleotides along the branches of each model. Computer simulation was performed 100 times for each model. The entropy evolution rate was found to give the correct toplogy of tree more often than other methods when the evolutionary rate of a lineage (branch) was higher than 0.5 par site.<br>

収録刊行物

  • Genes & genetic systems

    Genes & genetic systems 71(5), 323-327, 1996-10

    The Genetics Society of Japan

参考文献:  15件中 1-15件 を表示

被引用文献:  4件中 1-4件 を表示

各種コード

  • NII論文ID(NAID)
    10003760274
  • NII書誌ID(NCID)
    AA11077421
  • 本文言語コード
    ENG
  • 資料種別
    ART
  • ISSN
    13417568
  • NDL 記事登録ID
    4163736
  • NDL 雑誌分類
    ZR1(科学技術--生物学)
  • NDL 請求記号
    Z53-W539
  • データ提供元
    CJP書誌  CJP引用  NDL  J-STAGE 
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