Molecular identification of the active ninja retrotransposon and the inactive aurora element in Drosophila simulans and D. melanogaster.
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- Kanamori Yasushi
- Department of Applied Biology, Kyoto Institute of Technology
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- Hayashi Hideki
- Department of Applied Biology, Kyoto Institute of Technology
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- Yamamoto Masa-Toshi
- Department of Applied Biology, Kyoto Institute of Technology
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抄録
How transposable elements evolve is a key facet in understanding of spontaneous mutation and genomic rearrangements in various organisms. One of the best ways to approach this question is to study a newly evolved transposable element whose presence is restricted to a specific population or strain. The retrotransposons ninja and aurora may provide insights into the process of their evolution, because of their contrasting characteristics, even though they show high sequence identity. The ninja retrotransposon was found in a Drosophila simulans strain in high copy number and is potent in transposition. On the other hand, aurora elements are distributed widely among the species belonging to the Drosophila melanogaster species complex, but are immobile at least in D. melanogaster. In order to distinguish the two closely resembled retrotransposons by molecular means, we determined and compared DNA sequence of the elements, and identified characteristic internal deletions and nucleotide substitutions in 5'-long terminal repeats (LTR). Analyses of the structure of ninja homologs and LTR sequences amplified from both genomic and cloned DNA revealed that the actively transposable ninja elements were present only in D. simulans strains, but inactive aurora elements exist in both D. melanogaster and D. simulans.<br>
収録刊行物
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- Genes & Genetic Systems
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Genes & Genetic Systems 73 (6), 385-396, 1998
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詳細情報
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- CRID
- 1390282680422442496
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- NII論文ID
- 10003763456
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- NII書誌ID
- AA11077421
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- COI
- 1:CAS:528:DyaK1MXjslWht7c%3D
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- ISSN
- 18805779
- 13417568
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- NDL書誌ID
- 4681983
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- PubMed
- 10333568
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- 本文言語コード
- en
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- データソース種別
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- JaLC
- NDL
- Crossref
- PubMed
- CiNii Articles
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- 抄録ライセンスフラグ
- 使用不可