The Pacific lineage (2E) of JC polyomavirus is prevalent in Sumba Island, Eastern Indonesia

  • IKEGAYA HIROSHI
    Department of Forensic Medicine, Graduate School of Medicine, The University of Tokyo
  • SHAN ZHONG
    Department of Urology, Faculty of Medicine, The University of Tokyo
  • SHIMIZU HANA
    Department of Human Ecology, School of International Health, Graduate School of Medicine, The University of Tokyo
  • SEKIYAMA MAKIKO
    Transdisciplinary Initiative for Global Sustainability (TIGS), Integrated Research System for Sustainability Science (IR3S), The University of Tokyo
  • SOEMANTRI AUGUSTINUS
    Faculty of Medicine, Diponegoro University
  • ISHIDA TAKAFUMI
    Unit of Human Biology and Genetics, Department of Biological Sciences, Graduate School of Science, The University of Tokyo
  • NAKAZAWA MINATO
    Gunma University Graduate School of Medicine, Department of Socio-Environmental Medicine, Public Health Division
  • OHTSUKA RYUTARO
    National Institute for Environmental Studies
  • TAKASAKA TOMOKAZU
    Department of Urology, Faculty of Medicine, The University of Tokyo
  • SHIBUYA AYAKO
    Department of Urology, Faculty of Medicine, The University of Tokyo
  • KITAMURA TADAICHI
    Department of Urology, Faculty of Medicine, The University of Tokyo
  • YOGO YOSHIAKI
    Department of Urology, Faculty of Medicine, The University of Tokyo

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Recent studies have identified a Pacific lineage (2E) of JC polyomavirus (also designated as JC virus or JCV) that occurs in both Island Southeast Asia and Oceania, but not in mainland Asia. It has been postulated that this lineage traveled with Austronesian-speaking people who are now spread throughout Island Southeast Asia and Oceania (excluding Australia and inland and southern New Guinea). However, to date, the 2E lineage has been identified in Southeast Asia only in populations of the Philippine islands. Here we report that a high incidence of the 2E lineage was detected in the people of Sumba Island, eastern Indonesia.<br>

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