Diversity of Purple Phototrophic Bacteria, Inferred from pufM Gene, within Epilithic Biofilm in Tama River, Japan
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- Hirose Setsuko
- Department of Biological Sciences, Tokyo Metropolitan University Department of Biological Sciences, Tokyo Metropolitan University
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- Nagashima Kenji V. P.
- Department of Biological Sciences, Tokyo Metropolitan University Department of Biological Sciences, Tokyo Metropolitan University
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- Matsuura Katsumi
- Department of Biological Sciences, Tokyo Metropolitan University Department of Biological Sciences, Tokyo Metropolitan University
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- Haruta Shin
- Department of Biological Sciences, Tokyo Metropolitan University Department of Biological Sciences, Tokyo Metropolitan University
書誌事項
- タイトル別名
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- Diversity of Purple Phototrophic Bacteria, Inferred from <i>pufM</i> Gene, within Epilithic Biofilm in Tama River, Japan
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抄録
The diversity of purple phototrophic bacteria in algae-dominated biofilm of a streambed in Tama River, Japan was investigated. Clone library analysis of the pufM gene encoding a subunit of the photochemical reaction center of purple bacteria detected 18 operational taxonomic units (OTUs) in several classes of Proteobacteria. Most of the OTUs showed less than 85% identity to the PufM amino acid sequences of known phototrophic bacteria. These results suggest that phylogenetically divergent and unknown purple phototrophic bacteria are present in the epilithic biofilm of the river.<br>
収録刊行物
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- Microbes and environments
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Microbes and environments 27 (3), 327-329, 2012
日本微生物生態学会 / 日本土壌微生物学会 / Taiwan Society of Microbial Ecology / 植物微生物研究会 / 極限環境微生物学会
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詳細情報 詳細情報について
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- CRID
- 1390001204346496384
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- NII論文ID
- 10030869748
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- NII書誌ID
- AA11551577
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- COI
- 1:STN:280:DC%2BC38vptlGlsg%3D%3D
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- ISSN
- 13474405
- 13426311
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- NDL書誌ID
- 023919820
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- PubMed
- 22446305
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- 本文言語コード
- en
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- データソース種別
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- JaLC
- NDL
- Crossref
- PubMed
- CiNii Articles
- KAKEN
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- 抄録ライセンスフラグ
- 使用不可