Similarity Comparisons of Seeds Using Image Compression Technology

• Yoshihara, Ikuo

• 高島, 弘明

• Yamamori, Kunihito

• 菅原, 研

• Takashima, Hiroaki

• Sugawara, Ken

Bibliographic Information

Other Title

• 画像圧縮技術を用いた生物種の類似性比較
• ガゾウ アッシュク ギジュツ オ モチイタ セイブツシュ ノ ルイジセイ ヒカク

Abstract

Abstract Discovering signs of the evolution concealed in the intron that exists in eukaryote's gene to clarify how the seed had evolved becomes a problem. Kind edge relation of the seed can be examined by comparing genomes of different seeds. It takes plenty of time to compare genomes in detail over the wide range. However, if the range for which it searches beforehand is understood, it is efficient. It aims to squeeze the range of the retrieval of the genome in this research. This paper proposes a method of image compression for the genome sequence and an index comparing seeds. Seeds are compared with compression rates corresponding to different seeds. The experiments reveal the compressibility is related to similarity between seeds.

Journal

• Memoirs of Faculty of Engineering, University of Miyazaki

  Memoirs of Faculty of Engineering, University of Miyazaki 35 251-256, 2006-08-30

  宮崎大学工学部

Keywords

• Genome, Seeds, Image Compression, DNA

Details

• CRID: 1050288789742898176
• NII Article ID: 110005001913
• NII Book ID: AA00732558
• ISSN: 05404924
• HANDLE: 10458/444
• NDL BIB ID: 8568620
• Web Site: https://miyazaki-u.repo.nii.ac.jp/records/2479
• Web Site: http://id.ndl.go.jp/bib/8568620
• Web Site: https://ndlsearch.ndl.go.jp/books/R000000004-I8568620
• Text Lang: ja
• Article Type: departmental bulletin paper
• Data Source:
  • IRDB
  • NDL
  • CiNii Articles
  • KAKEN