Substituent Electron Push-Pull Interaction in Intermolecular Resonance-Assisted Hydrogen Bonds : Thymine/Adenine Base Pair and Their Complexes with Carboxylic Acids
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<jats:title>Abstract</jats:title> <jats:p>Theoretical studies of substituent R-effects on intermolecular resonance-assisted hydrogen bonds (RAHBs) of R-thymine/R-COOH, R-adenine/R-COOH complexes, and R-thymine/R-adenine base pairs have been made via Taft–Topsom treatment and natural bond orbital analysis, using density functional theory at the M06-2X/aug-cc-pVDZ level. Dimerization energy arising from constituent double H-bonds is essentially dependent on the nature of π-resonance of a substituent, i.e. π-electron-donating and -accepting properties. For monosubstituted base complexes with reference formic acid, π-donor (−R) substitution enhances π-delocalization of conjugated amide/amidine frames and activates the corresponding electron-donor site whereas π-acceptor (+R) substitution quenches the system via the same site, depending on their potentialities |σR+| and |σR−| of π-resonance effect. When both π-donor and π-acceptor substituents coexist in the complexes and base-pairs, they are activated under the support of mutual π-potentialities from counter molecules. Accordingly, one H-bond is significantly enhanced through cooperative electron push–pull interaction by substituents whereas the other being quenched due to the π-resonance effects in the opposite direction. Since bare thymine and adenine bases are actually found π-donating in nature against the amide/amidine frames of RAHBs, π-acceptor substitution of the counter molecule causes cooperative electron push–pull interaction on the corresponding H-bond and actually influences the dimerization energy depending on relative contribution of the constituent H-bonds.</jats:p>
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- Bulletin of the Chemical Society of Japan
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Bulletin of the Chemical Society of Japan 88 (10), 1466-1478, 2015-10
Tokyo : Chemical Society of Japan
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詳細情報 詳細情報について
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- CRID
- 1523951030555720576
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- NII論文ID
- 130005102814
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- NII書誌ID
- AA00580132
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- ISSN
- 00092673
- 13480634
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- NDL書誌ID
- 026791236
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- 本文言語コード
- en
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- NDL 雑誌分類
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- ZP1(科学技術--化学・化学工業)
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- データソース種別
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- NDL
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