The Folding of Trp-cage is Regulated by Stochastic Flip of the Side Chain of Tryptophan
-
- Takunori Yasuda
- College of Biological Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-0821 , Japan
-
- Yasuteru Shigeta
- Center for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-0821 , Japan
-
- Ryuhei Harada
- Center for Computational Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-0821 , Japan
抄録
<jats:title>Abstract</jats:title> <jats:p>Trp-cage is an artificial 20-residue protein and forms a hydrophobic core at its central cage upon folding. In the present study, the folding of Trp-cage was addressed by parallel cascade selection molecular dynamics (PaCS-MD). Our results of PaCS-MD indicate that flip of the side chain of tryptophan (W6) was correlated with the overall folding. In conclusion, flip of stochastic side chain of W6 regulates the folding into the native or mis-folded states of Trp-cage.</jats:p>
収録刊行物
-
- Chemistry Letters
-
Chemistry Letters 50 (1), 162-165, 2020-10-28
Oxford University Press (OUP)
- Tweet
キーワード
詳細情報 詳細情報について
-
- CRID
- 1361975846914360320
-
- NII論文ID
- 130007965969
-
- ISSN
- 13480715
- 03667022
-
- データソース種別
-
- Crossref
- CiNii Articles
- KAKEN