Phylogenetic supertrees : combining information to reveal the tree of life
著者
書誌事項
Phylogenetic supertrees : combining information to reveal the tree of life
(Computational biology series, v. 4)
Kluwer Academic Publishers, c2004
- : hb.
- : pb.
- : e-book
大学図書館所蔵 全9件
  青森
  岩手
  宮城
  秋田
  山形
  福島
  茨城
  栃木
  群馬
  埼玉
  千葉
  東京
  神奈川
  新潟
  富山
  石川
  福井
  山梨
  長野
  岐阜
  静岡
  愛知
  三重
  滋賀
  京都
  大阪
  兵庫
  奈良
  和歌山
  鳥取
  島根
  岡山
  広島
  山口
  徳島
  香川
  愛媛
  高知
  福岡
  佐賀
  長崎
  熊本
  大分
  宮崎
  鹿児島
  沖縄
  韓国
  中国
  タイ
  イギリス
  ドイツ
  スイス
  フランス
  ベルギー
  オランダ
  スウェーデン
  ノルウェー
  アメリカ
注記
Includes bibliographical references and index
内容説明・目次
内容説明
This is the first book on "phylogenetic supertrees", a recent, but controversial development for inferring evolutionary trees. Rather than analyze the combined primary character data directly, supertree construction proceeds by combining the tree topologies derived from those data. This difference in strategy has allowed for the exciting possibility of larger, more complete phylogenies than are otherwise currently possible, with the potential to revolutionize evolutionarily-based research. This book provides a comprehensive look at supertrees, ranging from the methods used to build supertrees to the significance of supertrees to bioinformatic and biological research. Reviews of many the major supertree methods are provided and four new techniques, including a Bayesian implementation of supertrees, are described for the first time. The far-reaching impact of supertrees on biological research is highlighted both in general terms and through specific examples from diverse clades such as flowering plants, even-toed ungulates, and primates. The book also critically examines the many outstanding challenges and problem areas for this relatively new field, showing the way for supertree construction in the age of genomics. Interdisciplinary contributions from the majority of the leading authorities on supertree construction in all areas of the bioinformatic community (biology, computer sciences, and mathematics) will ensure that this book is a valuable reference with wide appeal to anyone interested in phylogenetic inference.
目次
- List of contributors. Preface and acknowledgements. Introduction. New uses for old phylogenies: an introduction to the volume
- O.R.P. Bininda-Emonds. 1: Reviews of existing methods. The MRP method
- B.R. Baum, M.A. Ragan. An assessment of matrix representation with compatibility in supertree construction
- H.A. Ross, A.G. Rodrigo. MRF supertrees
- J.G. Burleigh, O.Eulenstein, D. Fernandez-Baca, M. J. Sanderson l. Everything you always wanted to know about average consensus and more
- F.-J. Lapointe, C. Levasseur. Tangled trees from multiple markers: reconciling conflict between phylogenies to build molecular supertrees
- J. Cotton, R.R.M. Page. 2: New supertree methods. Supertree methods for ancestral divergence dates and other applications
- D. Bryant, C. Semple, M. Steel Supertree algorithms for nested taxa
- P. Daniel, C. Semple. Quartet supertrees
- R. Piaggio-Talice, J.G. Burleigh, O. Eulenstein Bayesian supertrees
- F. Ronquist, J. Huelsenbeck, T. Britton 3: Methodological considerations. Some desiderata for liberal supertrees
- M. Wilkinson, J.L. Thorley, D. Pisani, F.-J. Lapointe, J.O. McInerney Taxonomy, supertrees and the Tree of Life
- R.R.M. Page. Garbage in, garbage out: data issues in supertree construction
- O.R.P. Bininda-Emonds, K.E> Jones, S.A. Price, M. Cardillo, A. Purvis Reconstucting divergence times for supertrees: a molecular approach
- R. Vos, A. Mooers. Performance of supertree methods on various data set decompositions
- U. Roshan, B.M.E. Moret, T.L. Williams, T. Warnow 4: A critical look at supertrees. Unrooted supertrees: Limitations, traps and phylogenic patchworks
- S. Boecker. The cladistics of matrixrepresentation with parsimony analysis
- H.N. Bryant. A critique of matrix representation with parsimony supertrees
- J. Gatesby, M. Springer. Supertrees, components and three-item data
- D.M. Williams. 5: Supertrees and their applications. A molecular supertree of the Artiodactyla
- A.S. Mahon. Supertrees: using complete phylogenies in comparative biology
- J.L. Gittleman, et al. Using supertrees to investigate species richness in grasses and flowering plants
- N. Salamin, T.J. Davies. Detecting diversification rate variation in supertrees
- B.R. Moore, K.M.A. Chan, M.J. Donothue Taxon index. Subject index.
「Nielsen BookData」 より