Analysis of phylogenetics and evolution with R
著者
書誌事項
Analysis of phylogenetics and evolution with R
(Use R! / series editors, Robert Gentleman, Kurt Hornik, Giovanni Parmigiani)
Springer, c2006
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注記
Includes bibliographical references (p. [199]-208) and index
内容説明・目次
内容説明
This book integrates a wide variety of data analysis methods into a single and flexible interface: the R language. The book starts with a presentation of different R packages and gives a short introduction to R for phylogeneticists unfamiliar with this language. The basic phylogenetic topics are covered. The chapter on tree drawing uses R's powerful graphical environment. A section deals with the analysis of diversification with phylogenies, one of the author's favorite research topics. The last chapter is devoted to the development of phylogenetic methods with R and interfaces with other languages (C and C++). Some exercises conclude these chapters.
目次
Introduction.- First Steps in R for Phylogeneticists.- Phylogenetic Data in R.- Plotting Phylogenies.- Phylogeny Estimation.- Analysis of Macroevolution with Phylogenies.- Developing and Implementing Phylogenetic Methods in R.
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