Metagenomics and its applications in agriculture, biomedicine and environmental studies

Author(s)

    • Li, Robert W.

Bibliographic Information

Metagenomics and its applications in agriculture, biomedicine and environmental studies

Robert W. Li, editor

(Genetics - research and issues series)

Nova Science Publishers, c2011

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Note

Includes bibliographical references and index

Description and Table of Contents

Description

Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. DNA sequencing (or alternatively, an assay of functional properties) is applied to the culture-independent analyses of complex and diverse ("meta") populations of microbes. The rapid growth of metagenomics entails an expanded focus on microbes in a wide range of basic and applied research fields, ranging from microbiology to agriculture, biomedicine to bioenergy, and from veterinary to clinical medicine. This book is an insightful and inclusive study on metagenomics and its applications.

Table of Contents

  • Foreword
  • Metagenomics: Methods & Challenges
  • Towards a More Complete Metagenomics Toolkit
  • Analyzing Metagenomic Data: Inferring Microbial Community Function with MG-RAST
  • Automatic Annotation of Microbial Genomes & Metagenomic Sequences
  • Next-Generation & Future DNA Sequencing Technologies & Metagenomics
  • Comparison of De Novo Short Read Assemblers on Simulated Metagenomic Data
  • Submetagenomics: Selective Sampling of Metagenomic Subsets of Interest
  • Dynamics of the Rumen Microbiota
  • Detection of Functional Shifts in the Rumen Microbiota in Response to Propionate Intake in Cattle
  • Carbohydrate Actives Enzymes Derived from Metagenomes: From Microbial Ecology to Enzymology
  • An Evolutionary Ecology Perspective on Comparative Metagenomics
  • Interactions of the Gut Microbiota & its Host in the Context of Gastrointestinal & Metabolic Diseases
  • Metagenomic Analysis of Human Gut Microbiota
  • Emerging Relevance of Metagenomics in Medicine
  • Metagenomic Gene Discovery
  • Emerging Techniques for Metagenome Screening
  • Viral Metagenomics: From Fish Slime to the World
  • Exploration of a Microbial Community for Novel Genetic Resources using Activity-Based Screening of a Metagenomic Library
  • Microbial Communities in Crude Petroleum Oils & Metagenomics
  • Environmental Metaproteomics: Identifying the Protein Machinery that Impact the Activities & Interactions of Microbes in Isolation or Communities
  • Index.

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