Liver proteomics : methods and protocols
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Bibliographic Information
Liver proteomics : methods and protocols
(Springer protocols)(Methods in molecular biology / John M. Walker, series editor, 909)
Springer, Humana Press, c2012
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- : pbk
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Includes bibliographical references and index
Description and Table of Contents
Description
The liver is responsible for a wide range of critical functions essential to life, and is composed of several different cell types. In Liver Proteomics: Methods and Protocols, expert researchers in the field detail many of the methods that are used to study the live. These methods include the most up-to-date strategies being used to characterize the liver proteome at the global, cellular, subcellular, post translational and functional level.Written in the highly successful Methods in Molecular Biology (TM) series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls.
Authoritative and practical, Liver Proteomics: Methods and Protocols seeks to aid scientists in the further study of this crucially important organ.
Table of Contents
1. Cell Surface Capturing (CSC) Technologies for the Surfaceome Discovery of Hepatocytes
Damaris Bausch-Fluck, Hofmann Andreas, and Bernd Wollscheid
2. An On-Target Desalting and Concentration Sample Preparation Protocol for MALDI-MS and MS/MS Analysus
Xumin Zhang, Quanhui Wang, Xiaomin Lou, Haidan Sun, Peter Roepstorff, and Siqi Liu
3. Plasma Membrane Isolation using Immobilized Concanavalin A Magnetic Beads
Yu-Chen Lee, Martina Srajer Gajdoski, Djuro Josic, and Sue-Hwa Lin
4. Analysis of the Cattle Liver Proteome by High-sensitive Liquid Chromatography Coupled with Mass Spectrometry method
Anna Maria Timperio, Gian Maria D'Amici, Lello Zolla
5. Producing a One-Dimensional Proteomic Map for Human Liver Cytochromes P450
Natalia A. Petushkova and Andrey V. Lisitsa
6. Assessing Heterogeneity of Peroxisomes-Isolation of Two Subpopulations from Rat Liver
Markus Islinger, Afsaneh Abdolzade-Bavil, Sven Liebler, Gerhardt Weber, Alfred Voelkl
7. Purification and Proteomic Analysis of Liver Membrane Skeletons
Jintang He, Yashu Liu, Qingsong Wang and Jianguo Ji
8. Liver Plasma Membranes: An Effective Method to Analyze Membrane Proteome
Rui Cao and Songping Liang
9. Quantitative analysis of liver Golgi Proteome in the Cell Cycle
Xuequn Chen, Philip C. Andrews and Yanzhuang Wang
10. Glycoproteins and Glycosylation: Apolipoprotein C3 Glycoforms by top-down MALDI-TOF Mass Spectrometry
Yan Zhang, Alan R. Sinaiko, Gary L. Nelsestuen
11. Phosphoproteomic Analysis of Liver Homogenates
Gokhan Demirkan, Arthur R. Salomon, and Philip A. Gruppuso
12. A Combination of Affinity Chromatography, 2D DIGE and Mass Spectrometry to Analyze the Phosphoproteome of Liver Progenitor Cells
Enrique Santamaria, Virginia Sanchez-Quiles, Joaquin Fernandez-Irigoyen and Fernando J. Corrales
13. Identifying Acetylated Proteins in Mitosis
Eva Rodriguez-Suarez, Jose M. Mato, and Felix Elortza
14. Comparative Proteome Analysis of a Human Liver Cell Line Stably Transfected with Hepatitis D Virus Full-length cDNA
Celso Cunha and Ana V. Coelho
15. Identification of New Autoimmune Hepatitis-specific Autoantigens by using Protein Microarray Technology
Lin Wu, and Guang Song
16. Proteomics Analysis of Human Non-alcoholic Fatty Liver
Eva Rodriguez-Suarez, Jose M. Mato and Felix Elortza
17. Proteomic Methods for Biomarker Discovery in a Rat Model of Alcohol Steatosis
Billy W. Newton, William K. Russell, David H. Russell, Shashi K. Ramaiah, and Arul Jayaraman
18. Targeted Mass Spectrometry-based Metabolomic Profiling through Multiple Reaction Monitoring of Liver and other Biological Matrices
Angelo D'Alessandro, Federica Gevi,, Lello Zolla
19. Discovery of Lamin B1 and Vimentin as Circulating Biomarkers for Early Hepatocellular Carcinoma
Kwong-Fai Won and John M. Luk
20. Combinatorial Peptide Ligand Libraries to Discover Liver Disease Biomarkers in Plasma Samples
Gian Maria D'Amici, Anna Maria Timperio, Sara Rinalducci, Lello Zolla
21. Isolation of Urinary Exosomes from Animal Models to Unravel Non-invasive Disease Biomarkers
Javier Conde-Vancells and Juan M. Falcon-Perez
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