Amyloid proteins : methods and protocols
著者
書誌事項
Amyloid proteins : methods and protocols
(Methods in molecular biology / John M. Walker, series editor, 849)(Springer protocols)
Humana Press, c2012
2nd ed
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注記
Previous ed.: 2005. Edited by Einar M. Sigurdsson
Includes bibliographical references and index
内容説明・目次
内容説明
Amyloid diseases are characterized by the deposition of insoluble fibrous amyloid proteins. The word "amyloid" indicates a starch-like compound, and though a misnomer, continues to be the accepted term for this group of protein conformational disorders. The second edition of Amyloid Proteins expands upon the previous edition with current, detailed protocols for the preparation of amyloid and its precursors, specific analytical methods for studying these proteins, cell culture models and assays for production of amyloid proteins, and protocols for amyloid extraction from tissue, its detection in vitro and in vivo, as well as nontransgenic methods for developing amyloid mouse models. Written in the highly successful Methods in Molecular Biology (TM) series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls.
Authoritative and practical, Amyloid Proteins, Second Edition seeks to aid scientists in the amyloid field to establish new techniques in their laboratories.
Authoritative and practical, Amyloid Proteins, Second Edition seeks to aid scientists in the amyloid field to establish new techniques in their laboratories.
目次
Part I. In Vivtro Models and Assays
1. Rapid Generation of Dityrosine Cross-linked A Oligomers via Cu-redox Cycling
Adam P. Gunn, Blaine R. Roberts and Ashley I Bush
2. Applications of Photochemical Cross-linking to the Study of Oligomerization of Amyloidogenic Proteins
Dahabada H.J. Lopes, Sharmisthia Sinha, Clark Rosenweig, Gal Bitan
3. Preparation of Stable Amyloid -Protein Oligomers of Defined Assembly Order
Clark Rosenweig, Kenjiro One, Kazuma Murakami, Devin K. Lowenstein, Gal Bitan, David B. Teplow
4. Purifications and Fibrillation of Full-Length Recombinant PrP
Natallia Makarava and Ilia V. Baskakov
5. Featuring Amyloids with Fourier Transform Infrared and Circular Dichroism Spectroscopies
Miguel Calero and Maria Gasset
6. Quasielestic Light Scattering Study of Amyloid -Protein Fibrillogenesis
Aleksey Lomakin and David B. Teplow
7. Conformations of Microtuble-Associated Protein Tau Mapped by Fluorescence Resonance Energy Transfer (FRET)
Sadasivam Jeganathan, Subashchandrabrose Chinnathamb, Eva-Maria Mandelkow, Echard Mandelkow
8. Measuring the Kinetics of Amyloid Fibril Elongation using Quartz Crystal Microbalances (QCM)
Alexander K. Buell, Christopher M. Dobson, and Mark E. Welland
9. X-ray Fibre Diffraction Studies of Amyloid Fibrils
Kyle L Morris and Louise C Serpell
10.Structural Characterization of Pre-fibrillar Intermediates and Amyloid Fibrils by Small-angle X-ray Scattering
Annette Eva Langkilde and Bente Vestergaard
11.Atomic Force Fluorescence Microscopy in the Characterization of Amyloid Fibril Assembly and Oligomeric Intermediates
12. Investigating Fibrillar Aggregates of Tau Protein by Atomic Force Microscopy
Susanne Wegmann, Daniel J. Muller and Eckhard Mandelkow
13. Structural Studies of Amyloids by Quenched Hydrogen-Deuterium Exchange by NMR
Marcal Vilar, Lei Wang and Roland Riek
14.Cyclic Amplification of Prion Protein Misfolding
Marcelo A Barria, Dennisse Gonzalez-Romero, and Claudio Soto
15. Search for Amyloid Binding Proteins by Affinity Chromatography
Miguel Calero, Agueda Rostagno, and Jorge Ghiso
Part II Cell Culture Models and Assays
16. Using Biophysical Approaches for Establishing the Links Between A Aggregation and Cytotoxicity in Vitro
Asad Jan and Hilal A. Lashuel
17. Preparation of Cultured Human Vascular Cells
Ingvar H. Olafsson, Dadi Th. Vilhjalmsson and Finnbogi R. Thormodsson
18. Murine Cerebrovascular Cells as a Cell Culture Model for Cerebral Amyloid Angiopathy: Isolation of Smooth Muscle and Endothelial Cells from Mouse Brain
Sebastien A. Gauthier, Susmita Sahoo, Sonia S. Jung, and Efrat Levy
19. In Vitro Assays Measuring Protection by Proteins such as Cystatin C of Primary Cortical Neuronal and Smooth Muscle Cells
Sebastein A. Gauthier, Belen Tizon, Susmita Sahoo, and Efrat Levy
20. Study of Neurotoxic Intracellular Calcium Signalling Triggered by Amyloids
Carlos Villalobos, Erica Caballero, Sara Sanz-Blasco and Lucia Nunez
21. Bacterial Amyloids
Yizhou Zhou, Luz Blanco, Daniel R. Smith, Matthew R. Chapman
22. Study of Amyloids using Yeast
Reed B. Wickner, Dmitry Kryndushkin, Frank Shewmaker, Ryan McGlinchey and Herman K. Edskes
23. Cell-to-cell Transmission of a-synuclein Aggregate
Seung-Jae Lee, Paula Desplats , He-Jin Lee, Brian Spencer and Eliezer Masliah
Part III In Vivo Models and Assays
24. Subcutaneous Adipose Tissue Biopsy for Amyloid Protein Studies
Per Westermark
25. Analysis of S100 Oligomers and Amyloids
Hugo M. Botelho, Gunter Fritz, Claudio M. Gomes
26. S100A8/A9 Amyloidosis in the Ageing Prostate: Relating ex vivo and in vitro Studies
Anna L. Gharibyan, Dina Raveh, Ludmilla A. Morozova-Roche
27. Isolation of Amyloid by Solubilization in Water
Dadi Th. Vilhjalmsson, Indiana E. Ingolfsdottir and Finnbogi R. Thormodsson
28. Histological Staining of Amyloid and Pre-Amyloid Peptides and Proteins in Mouse Tissue
Hameetha B. Rajamohamedsait and Einar M. Sigurdsson
29. A Pentameric Luminescent Conjugated Oligothiophene for Optical Imaging of in vitro Formed Amyloid Fibrils and Protein Aggregates in Tissue Sections
K. Peter R. Nilsson, Mikael Lindgren and Per Hammarstroem
30. In Vivo Magnetic Resonance Imaging of Amyloid- Plaques in Mice
Youssef Zaim Wadghiri, Dung Minh Hoang,, Thomas Wisniewski and Einar M. Sigurdsson
31 The Mouse Model for Scrapie: Inoculation, Clinical Scoring and Histopathological Techniques
Michele A. Di Bari, Romolo Nonno and Umberto Agrimi
32. Biochemical Isolation of Insoluble Tau in Transgenic Mouse Models of Tauopathies
Carl Julien and Emmanuel Planel
33. Tissue Processing Prior to Analysis of Alzheimer's Disease Associated Proteins and Metabolites, Including Ab
Stephen D. Schmidt, Ralph A. Nixon , and Paul M. Mathews
34. Ab Measurement by Enzyme-linked Immunosorbent Assay (ELISA)
Stephen D. Schmidt, Matthew J. Mazzella, Ralph A. Nixon, and Paul M. Mathews
35. Cognitive and Sensorimotor Tasks for Assessing Functional Impairments in Mouse Models of Alzheimer's Disease and Related Disorders
Allal Boutajangout, Yong Sheng Li, David Quartermain and Einar M Sigurdsson
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