Circadian rhythms and biological clocks

Author(s)

• Sehgal, Amita

Bibliographic Information

Circadian rhythms and biological clocks

edited by Amita Sehgal

（Methods in enzymology / editors in chief, Sidney P. Colowick, Nathan O. Kaplan, v. 551, 552）

Elsevier/Academic Press, c2015

• pt. A
• pt. B

Description and Table of Contents

Volume

pt. A ISBN 9780128012185

Description

Two new volumes of Methods in Enzymology continue the legacy of this premier serial with quality chapters authored by leaders in the field. Circadian Rhythms and Biological Clocks Part A and Part B is an exceptional resource for anybody interested in the general area of circadian rhythms. As key elements of timekeeping are conserved in organisms across the phylogenetic tree, and our understanding of circadian biology has benefited tremendously from work done in many species, the volume provides a wide range of assays for different biological systems. Protocols are provided to assess clock function, entrainment of the clock to stimuli such as light and food, and output rhythms of behavior and physiology. This volume also delves into the impact of circadian disruption on human health. Contributions are from leaders in the field who have made major discoveries using the methods presented here.

Table of Contents

1. Studying Circadian Rhythm and Sleep Using Genetic Screens in Drosophila Sofia Axelrod, Lino Saez and Michael W. Young 2. Dissecting the Mechanisms of the Clock in Neurospora Jennifer Hurley, Jennifer J. Loros and Jay C. Dunlap 3. High Throughput and Quantitative Approaches for Measuring Circadian Rhythms in Cyanobacteria Using Bioluminescence Ryan K. Shultzaberger, Mark L. Paddock, Takeo Katsuki, Ralph J. Greenspan and Susan S. Golden 4. Using Circadian Entrainment to Find Cryptic Clocks Zheng Eelderink-Chen, Maria Olmedo, Jasper Bosman and Martha Merrow 5. Wavelet-based Analysis of Circ adian Behavioral Rhythms Tanya L. Leise 6. Genetic Analysis of Drosophila Circadian Behavior in Semi-Natural Conditions Edward W Green, Emma K O'Callaghan, Mirko Pegoraro, J Douglas Armstrong, Rodolfo Costa3 and Charalambos P Kyriacou 7. Methods to Study Molecular Mechanisms of the Neurospora Circadian Clock Joonseok Cha, Mian Zhou, and Yi Liu 8. Detecting KaiC Phosphorylation Rhythms of the Cyanobacterial Circadian Oscillator in Vitro and in Vivo Yong-Ick Kim, Joseph S. Boyd, Javier Espinosa, and Susan S. Golden 9. The Role of Casein Kinase I in the Drosophila Circadian Clock Jeffrey L. Price, Jin-Yuan Fan, Andrew Keightley and John C. Means 10. Purification and Analysis of PERIOD Protein Complexes of the Mammalian Circadian Clock Jin Young Kim, Pieter Bas Kwak, Michael Gebert, Hao A. Duong and Charles J. Weitz 11. Best Practices for Fluorescence Microscopy of the Cyanobacterial Circadian Clock Susan E. Cohen, Marcella L. Erb, Joe Pogliano and Susan S. Golden 12. Structural and Biophysical Methods to Analyze Clock Function and Mechanism Martin Egli 13. Identification of Small Molecule Modulators of the Circadian Clock Tsuyoshi Hirota and Steve A. Kay 14. ChIP-Seq and RNA-Seq Methods to Study Circadian Control of Transcription in Mammals Joseph S. Takahashi, Vivek Kumar , Prachi Nakashe, Nobuya Koike, Hung-Chung Huang, Carla B. Green, and Tae-Kyung Kim 15. Chipping away at the Drosophila Clock Jian Zhou, Wangjie Yu and Paul E. Hardin 16. Considerations for RNA-seq Analysis of Circadian Rhythms Jiajia Li, Gregory R Grant, John B Hogenesch and Michael E Hughes 17. RNA-Seq Profiling of Small Numbers of Drosophila Neurons Katharine Abruzzi, Xiao Chen, Emi Nagoshi, Abby Zadina, and Michael Rosbash 18. Analysis of Circadian Regulation of Poly(A) Tail Length Shihoko Kojima and Carla B. Green 19. Sample Preparation for Phosphoproteomic Analysis of Circadian Time Series in Arabidopsis Thaliana Johanna Krahmer, Matthew M Hindle, Sarah F Martin, Thierry Le Bihan and Andrew J Millar

Volume

pt. B ISBN 9780128033807

Description

Two new volumes of Methods in Enzymology continue the legacy of this premier serial with quality chapters authored by leaders in the field. Circadian Rhythms and Biological Clocks Part A and Part B is an exceptional resource for anybody interested in the general area of circadian rhythms. As key elements of timekeeping are conserved in organisms across the phylogenetic tree, and our understanding of circadian biology has benefited tremendously from work done in many species, the volume provides a wide range of assays for different biological systems. Protocols are provided to assess clock function, entrainment of the clock to stimuli such as light and food, and output rhythms of behavior and physiology. This volume also delves into the impact of circadian disruption on human health. Contributions are from leaders in the field who have made major discoveries using the methods presented here.

Table of Contents

• 1. Measuring Synchrony in the Mammalian Central Circadian Circuit Erik D. Herzog, Istvan Z. Kiss and Cristina Mazuski 2. Patch Clamp Electrophysiology in Drosophila Circadian Pacemaker Neurons Matthieu Flourakis and Ravi Allada 3. Glial Cell Regulation of Rhythmic Behavior F. Rob Jackson, Fanny S. Ng, Sukanya Sengupta, Samantha You and Yanmei Huang 4. Neurophysiological Analysis of the Suprachiasmatic Nucleus
• A Challenge at Multiple Levels Johanna H. Meijer and Stephan Michel 5. Photic Entrainment in Drosophila Assessed by Locomotor Activity Recordings Matthias Schlichting and Charlotte Helfrich-Foerster 6. Photic Regulation of Clock Systems Steven Hughes, Aarti Jagannath, Mark W. Hankins, Russell G. Foster and Stuart N. Peirson 7. Response of Peripheral Rhythms to the Timing of Food Intake Megumi Hatori and Satchidananda Panda 8. Circadian Regulation of Cellular Physiology Peek, C.B., Ramsey, K.M. , Levine, D.C. , Marcheva, B., Perelis, M and Bass, J. 9. Analysis of the Redox Oscillations in The Circadian Clockwork Nikolay B. Milev, Guillaume Rey, Utham K. Valekunja, Rachel S. Edgar, John S. O'Neill and Akhilesh B. Reddy 10. Clocks and Cardiovascular Function Sarah C. McLoughlin, Philip Haines and Garret A. FitzGerald 11. Measuring Circadian Clock Function in Human Cells Ludmila Gaspar and Steven A. Brown 12. Human Activity and Rest in Situ Till Roenneberg , Lena K Keller , Dorothee Fischer, Joana L Matera, Celine Vetter, and Eva C Winnebeck 13. Phenotyping of Neurobehavioral Vulnerability to Circadian Phase During Sleep Loss Namni Goel, Mathias Basner and David F. Dinges 14. Genetics of Human Sleep Behavioral Phenotypes Pei-Ken Hsu , Louis J. Ptacek and Ying-Hui Fu 15. Sleep and Circadian Rhythm Disruption and Recognition Memory in Schizophrenia Shu K. E. Tam, David Pritchett, Laurence A. Brown, Russell G. Foster, David M. Bannerman and Stuart N. Peirson

by "Nielsen BookData"

Details

• NCID: BB18219825
• ISBN:
  • 9780128012185
  • 9780128033807
• Country Code: ne
• Title Language Code: eng
• Text Language Code: eng
• Place of Publication: Amsterdam ; Tokyo
• Pages/Volumes: 2 v.
• Size: 24 cm
• Classification:
  • DC23 : 571.77
• Subject Headings:
  • LCSH : Circadian rhythms
• Parent Bibliography ID:
  • BA00197543