Protein design : methods and applications

著者

    • Köhler, Valentin

書誌事項

Protein design : methods and applications

edited by Valentin Köhler

(Methods in molecular biology / John M. Walker, series editor, 1216)(Springer protocols)

Humana Press, c2014

2nd ed

  • : [cased]

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注記

Includes bibliographical references and index

Also published electronically

内容説明・目次

内容説明

Protein Design: Method and Applications, Second Edition expands upon the previous edition with current, detailed ideas on how to approach a potential protein design project. With new chapters on metals as structure-forming elements and functional sites, the design and characterization of fluorinated proteins, top-down symmetric deconstruction and the design of protein libraries and novel or repurposed enzymes. Written in the highly successful Methods in Molecular Biologyseries format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Thorough and intuitive, Protein Design: Method and Applications, Second Edition provides a number of practical protocols and instructive reviews to aid in the creation of new experiments.

目次

1. De novo Design of Stable -helices Alexander Yakimov, Georgy Rychkov, and Michael Petukhov 2. Design of Monomeric Water-soluble b-hairpin and -sheet Peptides M. Angeles Jimenez 3. Combination of Theoretical and Experimental Approaches for the Design and Study of Fibril-forming Peptides Phanourios Tamamis, Emmanouil Kasotakis, Georgios Archontis, and Anna Mitraki 4. Posttranslational Incorporation of Non-canonical Amino Acids in the RNase S System by Semisynthetic Protein Assembly Maika Genz and Norbert Strater 5. Design, Synthesis, and Study of Fluorinated Proteins Benjamin C. Buer and E. Neil G. Marsh 6. High-Quality Combinatorial Protein Libraries Using the Binary Patterning Approach Luke H. Bradley 7. Methods for Library-Scale Computational Protein Design Lucas B. Johnson, Thaddaus R. Huber, and Christopher D. Snow 8. Symmetric Protein Architecture in Protein Design: Top-Down Symmetric Deconstruction Liam M. Longo and Michael Blaber 9. Identification of Protein Scaffolds for Enzyme Design using Scaffold Selection Andre C. Stiel, Kaspar Feldmeier, and Birte Hoecker 10. Computational Design of Novel Enzymes without Cofactors Matthew D. Smith, Alexandre Zanghellini, and Daniela Grabs 11. De novo Design of Peptide Scaffolds as Novel Pre-organised Ligands for Metal-ion Coordination Aimee J. Gamble and Anna F. A. Peacock 12. Computational Design of Metalloproteins Avanish S. Parmar, Douglas Pike, and Vikas Nanda 13. Incorporation of Modified and Artificial Cofactors into Naturally Occurring Protein Scaffolds Koji Oohor and Takashi Hayashi 14. Computational Redesign of Metalloenzymes for Catalyzing New Reactions Per Jr. Greisen and Sagar D. Khare

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