Biomolecular thermodynamics : from theory to application

著者

    • Barrick, Douglas E.

書誌事項

Biomolecular thermodynamics : from theory to application

Douglas E. Barrick

(Foundations of biochemistry and biophysics series)

CRC Press, c2018

  • : pbk

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注記

Includes bibliographical references and index

内容説明・目次

内容説明

"an impressive text that addresses a glaring gap in the teaching of physical chemistry, being specifically focused on biologically-relevant systems along with a practical focus.... the ample problems and tutorials throughout are much appreciated." -Tobin R. Sosnick, Professor and Chair of Biochemistry and Molecular Biology, University of Chicago "Presents both the concepts and equations associated with statistical thermodynamics in a unique way that is at visual, intuitive, and rigorous. This approach will greatly benefit students at all levels." -Vijay S. Pande, Henry Dreyfus Professor of Chemistry, Stanford University "a masterful tour de force.... Barrick's rigor and scholarship come through in every chapter." -Rohit V. Pappu, Edwin H. Murty Professor of Engineering, Washington University in St. Louis This book provides a comprehensive, contemporary introduction to developing a quantitative understanding of how biological macromolecules behave using classical and statistical thermodynamics. The author focuses on practical skills needed to apply the underlying equations in real life examples. The text develops mechanistic models, showing how they connect to thermodynamic observables, presenting simulations of thermodynamic behavior, and analyzing experimental data. The reader is presented with plenty of exercises and problems to facilitate hands-on learning through mathematical simulation. Douglas E. Barrick is a professor in the Department of Biophysics at Johns Hopkins University. He earned his Ph.D. in biochemistry from Stanford University, and a Ph.D. in biophysics and structural biology from the University of Oregon.

目次

Series Preface Preface Acknowledgments Note to Instructors Author Chapter 1 Probabilities and Statistics in Chemical and Biothermodynamics Chapter 2 Mathematical Tools in Thermodynamics Chapter 3 The Framework of Thermodynamics and the First Law Chapter 4 The Second Law and Entropy Chapter 5 Free Energy as a Potential for the Laboratory and for Biology Chapter 6 Using Chemical Potentials to Describe Phase Transitions Chapter 7 The Concentration Dependence of Chemical Potential, Mixing, and Reactions Chapter 8 Conformational Equilibrium Chapter 9 Statistical Thermodynamics and the Ensemble Method Chapter 10 Ensembles That Interact with Their Surroundings Chapter 11 Partition Functions for Single Molecules and Chemical Reactions Chapter 12 The Helix-Coil Transition Chapter 13 Ligand Binding Equilibria from a Macroscopic Perspective Chapter 14 Ligand Binding Equilibria from a Microscopic Perspective Appendix: How to Use Mathematica 485 Bibliography Index

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