Plant mitochondria
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書誌事項
Plant mitochondria
（Annual plant reviews, v. 50）
Wiley Blackwell, 2018
2nd ed
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注記
Previous edition: 2007
Includes bibliographical references and index
内容説明・目次
内容説明
This long-awaited second edition covers the major changes that have occurred in the field over the last decade
Completely revised with the most up-to-date research and including brand new chapters, Annual Plant Reviews, Volume 50: Plant Mitochondria, 2nd Edition presents the multifaceted roles of mitochondria in plants. The book starts with a short history of plant mitochondrial research; discusses how coevolution shaped plant mitochondrial gene expression; explains control of number, shape, size, and motility of mitochondria; delves into stress responses and roles in stress alleviation in mitochondrial biochemistry; covers the damage repair pathway of the Calvin-Benson cycle; and more.
Containing sections written by many of the world's leading researchers in this area, this book brings together and reviews for the first time many recent advances. It offers chapters on: Bioblasts, Cytomikrosomen & Chondriosomes; The Crosstalk Between Genomes; The Dynamic Chondriome; Metal Homeostasis in Plant Mitochondria; RNA Metabolism and Transcript Regulation; Mitochondrial Regulation and Signalling in the Photosynthetic Cell; Mitochondrial Biochemistry; Ecophysiology of Plant Respiration; Photorespiration; and Mitochondria and Cell Death.
Annual Plant Reviews, Volume 50: Plant Mitochondria, 2nd Edition is an extremely important and timely book that will be of great use and interest to plant scientists, cell and molecular biologists, and biochemists.
目次
List of Contributors xv
Preface xvii
1 Bioblasts, Cytomikrosomen and Chondriosomes: A Short Incomplete History of Plant Mitochondrial Research 1
David C. Logan and Iain Scott
1.1 Discovery 1
1.2 Complexity of nomenclature 2
1.2.1 Discoveries of mitochondria in plants 2
1.3 Mitochondrial are dynamic 3
1.4 Mitochondrial function and outputs 4
1.4.1 Vital staining of mitochondria with Janus green B and identification of mitochondria as sites of redox 5
1.4.2 Special features of plant mitochondria 6
1.5 Mitochondrial DNA 6
1.5.1 Mitochondria, photosynthesis and carbon cycling 7
1.5.2 A trigger for death 7
1.6 Known knowns, known unknowns and unknown unknowns of mitochondrial biology 8
References 9
2 Mitochondrial DNA Repair and Genome Evolution 11
Alan C. Christensen
2.1 Plant mitochondrial genomes are large and variable 11
2.1.1 Low mutation rates in genes 11
2.1.2 Genome Organization 12
2.1.3 Genome replication 13
2.2 The mutational burden hypothesis 13
2.2.1 Problems with the MBH and mutation rate measurements 13
2.3 DNA repairA ]based hypothesis 16
2.4 Additional mechanisms of DNA repair 19
2.4.1 Mismatch repair and MSH1 20
2.4.2 Nucleotide excision repair 22
2.5 Outcomes of DNA repair 22
2.6 How repair processes affect genome evolution 23
2.7 Unanswered questions 24
Acknowledgements 25
References 26
3 The CrossA ]Talk Between Genomes: How CoA ]Evolution Shaped Plant Mitochondrial Gene Expression 33
Francoise Budar and Hakim Mireau
3.1 Introduction 33
3.2 Evidence showing the versatility of factors involved in plant mitochondria gene expression 35
3.2.1 Transcription 35
3.2.2 RNA maturation 38
3.2.3 RNA editing 41
3.2.4 Intron splicing 44
3.3 Mitochondrial gene expression: coA ]evolution makes sense 46
3.3.1 CoA ]evolution of cytoplasmic male sterility 46
3.3.2 Most Rf genes encode PPR proteins 48
3.4 CoA ]evolution scenarios 50
3.5 Conclusion and perspectives 54
References 54
4 The Dynamic Chondriome: Control of Number, Shape, Size and Motility of Mitochondria 67
David C. Logan and Gael Paszkiewicz
4.1 Introduction 67
4.2 Motility 68
4.2.1 ActinA ]mediated displacement 68
4.2.2 Microtubules 70
4.3 Number 71
4.3.1 Division 71
4.3.2 A dynaminA ]independent division mechanism? 80
4.3.3 Fusion 81
4.4 The chondriostat: mitochondrial dynamics during development and following modification of cell environment 86
4.5 Mitochondrial quality control and regulation of dynamics to enable selective degradation of mitochondria 88
4.5.1 The mitophagy apparatus 89
4.5.2 FRIENDLY/CluA ]type proteins 92
4.6 Case study: mitochondrial dynamics during germination 94
4.6.1 The germination process 94
4.6.2 The chondriome during germination 96
4.7 Conclusions 99
Acknowledgements 99
References 100
5 Metal Homeostasis in Plant Mitochondria 111
Gianpiero Vigani and Marc Hanikenne
5.1 Introduction 111
5.2 Iron 114
5.2.1 Heme and FeA ]S clusters 114
5.2.2 Fe binding proteins 117
5.2.3 Fe transport 119
5.3 Copper 121
5.4 Zinc 123
5.5 Manganese 125
5.6 Trace metals in plant mitochondria 128
5.7 Metallome perturbation within mitochondria 129
5.8 Conclusions 132
Acknowledgements 132
References 133
6 RNA Metabolism and Transcript Regulation 143
Michal Zmudjak and Oren OstersetzerA ]Biran
6.1 Introduction 143
6.2 The mitochondrial transcription machinery 145
6.2.1 Analyses of mitochondrial promoter regions 146
6.2.2 RNA polymerases 147
6.2.3 CoA ]factors of the mitochondria transcription machinery 148
6.3 PostA ]transcriptional RNA processing 151
6.3.1 Trimming, RNA endA ]processing and decay in plant mitochondria 151
6.3.2 RNA editing 155
6.3.3 Splicing of mitochondrial group II introns 159
Acknowledgements 168
References 168
7 Mitochondrial Regulation and Signalling in the Photosynthetic Cell: Principles and Concepts 185
Iris Finkemeier and Markus Schwarzlander
7.1 Introduction 185
7.2 Regulation of protein functions within plant mitochondria 187
7.2.1 Regulation of transcription and translation within mitochondria 188
7.2.2 Regulation of nuclear gene expression 189
7.2.3 Regulation of cytosolic translation and protein import into mitochondria 192
7.2.4 Regulation of protein turnover within mitochondria 194
7.2.5 Regulation of function and activity of mitochondrial proteins by postA ]translational modifications and small molecules 195
7.2.6 Regulation of mitochondrial number and organization as set by motility, fission, fusion and mitophagy 207
7.3 Integration of chloroplast and mitochondrial regulation and signalling 209
7.3.1 Mitochondria and chloroplasts make up a joint operational unit in the light 209
7.3.2 Operational integration of mitochondria and chloroplasts requires interdependent regulation 210
7.3.3 Does the concept of 'mitochondrial retrograde signalling' need rethinking for green plant cells? 211
Acknowledgements 214
References 214
8 Mitochondrial Biochemistry: Stress Responses and Roles in Stress Alleviation 227
Richard P. Jacoby, A. Harvey Millar and Nicolas L. Taylor
8.1 Introduction 227
8.2 Plant mitochondrial oxidative stress 228
8.2.1 Accumulation of ROS in mitochondria 228
8.2.2 ROSA ]induced lipid peroxidation in mitochondria 230
8.2.3 Metallome changes during oxidative stress 231
8.2.4 Proteome changes during oxidative stress 232
8.3 Plant mitochondrial roles in harsh environments and in a changing climate 234
8.3.1 Mitochondrial roles under temperature stress 236
8.3.2 The roles of mitochondria in mediating drought tolerance 237
8.3.3 Mitochondrial respiration and salinity stress 240
8.4 StressA ]dissipating roles of plant mitochondrial metabolism and products 243
8.4.1 Mitochondrial impact on photosynthetic functions during environmental stress 243
8.4.2 RootA ]specific mitochondrial processes mediating tolerance to unfavourable soil conditions 245
8.4.3 Cellular survival during and following stress requires mitochondrial metabolism and its products 246
8.5 Future perspectives 247
Acknowledgements 247
References 247
9 Ecophysiology of Plant Respiration 269
Nestor Fernandez DelA ]Saz and Miquel RibasA ]Carbo
9.1 Introduction 269
9.2 What is respiration? 269
9.3 The CO2/O2 paradigm 271
9.4 Oxygen consumption 273
9.4.1 Measuring oxygen uptake of organs 273
9.4.2 The regulation of oxygen uptake 274
9.4.3 Plant respiration at the ecosystem scale 277
9.5 CO2 production 278
9.5.1 Measuring organ CO2 production 278
9.5.2 IRGA 279
9.5.3 Environmental effects on CO2 measurement 280
9.5.4 Plant and ecosystem scale 281
9.5.5 Open top chambers (smallA ]community studies) 281
9.5.6 FreeA ]air CO2 enrichment 282
9.6 Carbon balance 283
9.6.1 Ecosystem carbon balance (eddies) 283
9.6.2 Global carbon balance 284
References 284
10 Photorespiration - Damage Repair Pathway of the Calvin-Benson Cycle 293
Hermann Bauwe
10.1 Introduction 293
10.2 Photorespiration prevents potential damage from a side reaction of RuBP carboxylase 295
10.3 Plant photorespiratory carbon metabolism 296
10.3.1 Glycolate 2A ]phosphate becomes dephosphorylated to glycolate 297
10.3.2 Glycolate is converted into glycine in the peroxisome 300
10.3.3 Glycolate oxidation 301
10.3.4 H2O2 degradation 302
10.3.5 Transamination of glyoxylate to glycine 303
10.3.6 Mitochondrial reactions combine two molecules of glycine to form serine and CO2 305
10.3.7 Back in the peroxisome, hydroxypyruvate is produced from serine and becomes oxidized to glycerate 316
10.3.8 Back in the chloroplast, 3PGA is formed to replenish the Calvin-Benson cycle 317
10.4 Interaction of photorespiration with other aspects of metabolism 318
10.4.1 Plant photorespiratory nitrogen cycle 318
10.4.2 TCA cycle and oxidative phosphorylation 321
10.5 Improving photosynthesis 322
Acknowledgement 323
References 324
11 Mitochondria and Cell Death 343
Olivier van Aken
11.1 Introduction 343
11.2 Conservation of mitochondrial PCD pathways in plants 344
11.3 The role of mitochondrial ROS in plant PCD 347
11.4 NonA ]ROSA ]related molecules and plant PCD 350
11.5 An update on the mitochondrial permeability transition pore 351
11.6 Senescence, autophagy and PCD 354
11.7 Interactions between mitochondria and chloroplasts during PCD 355
11.8 Conclusions 357
Acknowledgements 359
References 360
Index
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