Immunoinformatics
Author(s)
Bibliographic Information
Immunoinformatics
（Methods in molecular biology / John M. Walker, series editor, 2131）（Springer protocols）
Humana Press, c2020
3rd ed
- : [hardback]
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Note
Includes bibliographical references and index
Description and Table of Contents
Description
This book covers a wide range of diverse immunoinformatics research topics, involving tools and databases of potential epitope prediction, HLA gene analysis, MHC characterizing, in silico vaccine design, mathematical modeling of host-pathogen interactions, and network analysis of immune system data. In that way, this fully updated volume explores the enormous value of computational tools and models in immunology research. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of key insights and detailed implementation advice to encourage successful results in the lab.
Authoritative and practical, Immunoinformatics, Third Edition serves as an ideal guide for scientists working at the intersection of bioinformatics, mathematical modelling, and statistics for the study of immune systems biology.
Table of Contents
1. Reverse Vaccinology and Its Applications
Amol M. Kanampalliwar
2. Computational Methodology for Peptide Vaccine Design for Zika Virus: A Bioinformatics Approach
Ashesh Nandy, Smarajit Manna, and Subhas C. Basak
3. High-Definition Genomic Analysis of HLA Genes via Comprehensive HLA Allele Genotyping
Shuji Kawaguchi and Fumihiko Matsuda
4. A Computational Vaccine Designing Approached for MERS-CoV Infections
Hiba Siddig Ibrahim and Shamsoun Khamis Kafi
5. n Alignment-Independent Platform for Allergenicity Prediction
Ivan Dimitrov and Irini Doytchinova
6. Immunoinformatics and Epitope Prediction
Jayashree Ramana and Kusum Mehla
7. Vaccine Design against Leptospirosis Using an Immunoinformatics Approach
Kumari Snehkant Lata, Vibhisha Vaghasia, Shivarudrappa Bhairappanvar, Saumya Patel, and Jayashankar Das
8. Characterizing MHC-I Genotype Predictive Power for Oncogenic Mutation Probability in Cancer Patients
Lainie Beauchemin, Michael Slifker, David Rossell, and Joan Font-Burgada
9. Network Analysis of Large-Scale Data and Its Application to Immunology
Lauren Benoodt and Juilee Thakar
10. In Silico Guided Sequence Modification of Epitopes in Cancer Vaccine Development
Winfrey Pui Yee Hoo, Pui Yan Siak, and Lionel L.A. In
11. An Immunoinformatics Approach in Design of Synthetic Peptide Vaccine Against Influenza Virus
Neha Lohia and Manoj Baranwal
12. A New Approach to Assess mAb Aggregation
Illarion V. Turko
13. Generation of Variability-Free Reference Proteomes from Pathogenic Organisms for Epitope-Vaccine Design
Jose L. Sanchez-Trincado and Pedro A. Reche
14. Immunoinformatic Identification of Potential Epitopes
Priti Desai, Divya Tarwadi, Bhargav Pandya, and BhruguYagnik
15. Immunoinformatic Approaches for Vaccine Designing Against Viral Infections
Richa Anand and Richa Raghuwanshi
16. EPCES and EPSVR: Prediction of B-Cell Antigenic Epitopes on Protein Surfaces with Conformational Information
Shide Liang, Dandan Zheng, Bo Yao, and Chi Zhang
17. SVMTriP: A Method to Predict B-Cell Linear Antigenic Epitopes
Bo Yao, Dandan Zheng, Shide Liang, and Chi Zhang
18. Modeling Phage-Bacteria Dynamics
Saptarshi Sinha, Rajdeep Kaur Grewal, and Soumen Roy
19. Dynamics of Mycobacteriophage -Mycobacterial Host Interaction
Arabinda Ghosh, Tridip Phukan, Surabhi Johari, Ashwani Sharma, Abha Vashista, and Subrata Sinha
20. Multiplexing of Immune Markers via Electrochemiluminescence Immunoassays for Systems Biology
Vrushali Abhyankar and Ammaar H. Abidi
21. AAgAtlas 1.0: A Database of Human Autoantigens Extracted from Biomedical Literature
Dan Wang, Yupeng Zhang, Qing Meng, and Xiaobo Yu
22. Application of Meta Learning to B-Cell Conformational Epitope Prediction
Yuh-Jyh Hu
23. PCPS: A Web Server to Predict Proteasomal Cleavage Sites
Marta Gomez-Perosanz, Alvaro Ras-Carmona, and Pedro A. Reche
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