Coronaviruses : methods and protocols
著者
書誌事項
Coronaviruses : methods and protocols
（Methods in molecular biology / John M. Walker, series editor, 1282）（Springer protocols）
Humana Press, c2015
- : [hardback]
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注記
Includes bibliographical references and index
内容説明・目次
内容説明
This volume aims to describe a variety of techniques that reflects the wide range of research currently performed in the field of coronavirology, and begins with an overview of current understandings of coronavirus replication and pathogenesis to introduce specialists and non-specialists to the field. The rest of the book is divided into several sections of chapters beginning with those that describe identification, diagnosis, and study of the evolution of coronaviruses. The next few chapters discuss the preparation of cells and organ cultures useful in propagating coronaviruses and titration techniques, as well as techniques for analyzing virus functions that require purification of the viruses. The next chapters describe two commonly used reverse genetics techniques for coronaviruses, and techniques detailing identification of cellular receptors, binding profiles of viral attachment proteins, and virus-cell fusion. The final chapters cover a broad spectrum of techniques to identify virus-host protein-protein interactions, confirm the functional role of these proteins in virus replication, study host cell responses through genome-wide or pathway-specific approaches, and visualize virus replication complexes. Written in the highly successful Methods in Molecular Biology series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results in the laboratory.
Authoritative and practical, Coronaviruses: Methods and Protocols appeals to a wide variety of scientists because it highlights techniques that are currently used in the coronovirology field, while also discussing practices applicable to other virology fields.
目次
1. Coronaviruses: An Overview of Their Replication and Pathogenesis
Anthony R. Fehr and Stanley Perlman
Section I: Detection, Diagnosis and Evolution of Coronaviruses
2. Identification of a Novel Coronavirus from Guinea Fowl Using Metagenomics
Mariette F. Ducatez and Jean-Luc Guerin
3. Serological Diagnosis of Feline Coronavirus Infection by Immunochromatographic Test
Tomomi Takano and Tsutomu Hohdatsu
4. Estimation of Evolutionary Dynamics and Selection Pressure in Coronaviruses
Muhammad Munir and Marti Cortey
Section II: Propogation, Titration, and Purification of Coronaviruses
5. The Preparation of Chicken Tracheal Organ Cultures for Virus Isolation, Propagation, and Titration
Ruth M. Hennion
6. The Preparation of Chicken Kidney Cell Cultures for Virus Propagation
Ruth M. Hennion and Gillian Hill
7. Isolation and Propagation of Coronaviruses in Embryonated Eggs
James S. Guy
8. Characterization of Human Coronaviruses on Well-Differentiated Human Airway Epithelial Cell Cultures
Hulda R. Jonsdottir and Ronald Dijkman
9. Quantification of Infectious Bronchitis Coronaviruses by Titration in vitro and in ovo
Joeri Kint, Helena J. Maier, and Erik Jagt
10. Purification of Coronavirus Virions for Cryo-EM and Proteomic Analysis
Stuart Dent and Benjamin W. Neuman
11. Partial Purification of IBV and Subsequent Isolation of Viral RNA for Next Generation Sequencing
Sarah M. Keep, Erica Bickerton, and Paul Britton
Section III: Manipulating the Genomes of Coronaviruses
12. Transient Dominant Selection for the Modification and Generation of Recombinant Infectious Bronchitis Coronaviruses
Sarah M. Keep, Erica Bickerton, and Paul Britton
13. Engineering Infectious cDNAs of Coronavirus as Bacterial Artificial Chromosomes
Fernando Almazan, Silvia Marquez-Jurado, Aitor Nogales, and Luis Enjuanes
Section IV: Coronavirus Attachment and Entry
14. Protein Histochemistry Using Coronaviral Spike Proteins: Studying Binding Profiles and Sialic Acid Requirements for Attachment to Tissues
I. N. Ambepitiya Wickramasinghe, M. H. Verheije
15. Identification of Protein Receptors for Coronaviruses by Mass Spectrometry
V. Stalin Raj, Mart M. Lamers, Saskia L. Smits, Jeroen A. A. Demmers, Huihui Mou, Berend-Jan Bosch, Bart L. Haagmans
16. Single Particle Tracking Assay to Study Coronavirus Membrane Fusion
Deirdre A. Costello and Susan Daniel
Section V: Studying Virus-Host Interactions
17. Studying Coronavirus-Host Protein Interactions
Chee-Hing Yang, Hui-Chun Li, Cheng-Huei Hung, and Shih-Yen Lo
18. A Field-Proven Yeast Two-Hybrid Protocol Used to Identify Coronavirus-Host Protein-Protein Interactions
Pierre-Olivier Vidalain, Yves Jacob, Marne C. Hagemeijer, Louis M. Jones, Gregory Neveu, Jean-Pierre Roussarie, Peter J. M. Rottier, Frederic Tangy, and Cornelis A. M. de Haan
19. Investigation of the Functional Roles of Host Cell Proteins Involved in Coronavirus Infection Using Highly Specific and Scalable RNA Interference (RNAi) Approach
Jean Kaoru Millet and Beatrice Nal
20. Transcriptome Analysis of Feline Infectious Peritonitis Virus (FIPV) Infection
Parvaneh Mehrbod, Mohammad Syamsul Reza Harun, Ahmad Naqib Shuid, Abdul Rahman Omar
21. Quantification of Interferon Signaling in Avian Cells
Joeri Kint and Maria Forlenza
22. Studying the Dynamics of Coronavirus Replicative Structures
Marne C. Hagemeijer and Cornelis A. M. de Haan
23. Preparation of Cultured Cells Using High Pressure Freezing and Freeze Substitution for Subsequent 2D or 3D Visualization in the Transmission Electron Microscope
Philippa C. Hawes
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