Developmental biology of the sea urchin and other marine invertebrates : methods and protocols

書誌事項

Developmental biology of the sea urchin and other marine invertebrates : methods and protocols

edited by David J. Carroll, Stephen A. Stricker

(Methods in molecular biology / John M. Walker, series editor, 2219)(Springer protocols)

Humana Press, c2021

2nd ed.

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注記

Includes bibliographical references and index

内容説明・目次

内容説明

This detailed second edition presents a wide variety of marine invertebrate model systems, from cephalochordata to holothurians, along with novel experimental protocols for taking advantage of their unique properties. The techniques range from culturing the organisms to modifying their DNA. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and up-to-date, Developmental Biology of the Sea Urchin and Other Marine Invertebrates: Methods and Protocols, Second Edition is an ideal guide for researchers working with these versatile organisms and for furthering our understanding of fundamental biological questions.

目次

1. Laboratory Culture and Mutagenesis of Amphioxus (Branchiostoma floridae) Linda Z. Holland and Guang Li 2. Handling and Manipulation of Gametes and Embryos of the Annelidan Worm Pseudopotamilla occelata Ryusaku Deguchi and Takeshi Nakano 3. The Starfish Asterina pectinifera: Collection and Maintenance of Adults and Rearing and Metamorphosis of Larvae Naoyuki Murabe, Ei-ichi Okumura, Kazuyoshi Chiba, Enako Hosoda, Susumu Ikegami, and Takeo Kishimoto 4. Experimental Tools to Study Regeneration in the Sea Anemone Nematostella vectensis Aldine R. Amiel and Eric Roettinger 5. Staining and Tracking Methods for Studying Sponge Cell Dynamics Carole Borchiellini, Sandie M. Degnan, Emilie Le Goff, Caroline Rocher, Amelie Vernale, Stephen Baghdiguian, Nina Sejourne, Florent Marschal, Andre Le Bivic, Nelly Godefroy, Bernard M. Degnan, and Emmanuelle Renard 6. Microscopy Studies of Placozoans Carolyn L. Smith, Tatiana D. Mayorova, Christine A. Winters, Thomas S. Reese, Sally P. Leys, and Andreas Heyland 7. Identification of SH2 Domain-Mediated Protein Interactions that Operate at Fertilization in the Sea Star Patiria miniata Lauren Bates, Emily Wiseman, Jamie Kitson, and David J. Carroll 8. Marine Nemertean Worms for Immunoblotting Studies of Oocyte Aging Stephen A. Stricker 9. Recovery of Sea Star Egg Cell Surface Proteins Released at Fertilization Emily Wiseman, Lauren Bates, and David J. Carroll 10. Quantifying Cell Proliferation During Regeneration of Aquatic Worms Eduardo E. Zattara and B. Duygu OEzpolat 11. In Situ Hybridization Techniques in the Homoscleromorph Sponge Oscarella lobularis Laura Fierro-Constain, Caroline Rocher, Florent Marschal, Quentin Schenkelaars, Nina Sejourne, Carole Borchiellini, and Emmanuelle Renard 12. Methodology for Whole Mount and Fluorescent RNA In Situ Hybridization in Echinoderms: Single, Double, and Beyond Margherita Perillo, Periklis Paganos, Maxwell Spurrell, Maria I. Arnone, and Gary M. Wessel 13. Gene Editing in the Ascidian Phallusia mammillata and Tail Nerve Cord Formation Alex McDougall, Celine Hebras, Isa Gomes, and Remi Dumollard 14. Transcriptomic Analysis in the Sea Anemone Nematostella vectensis Jacob F. Warner and Eric Roettinger 15. RNA Interference on Regenerating Holothurian Gut Tissues Miosotis Alicea-Delgado, Samir A. Bello-Melo, and Jose E. Garcia-Arraras 16. ATAC-Seq for Assaying Chromatin Accessibility Protocol Using Echinoderm Embryos Marta Silvia Magri, Danila Voronov, Jovana Randelovic, Claudia Cuomo, Jose Luis Gomez-Skarmeta, and Maria I. Arnone 17. Usage of the Sea Urchin Hemicentrotus pulcherrimus Database, HpBase Sonoko Kinjo, Masato Kiyomoto, Takashi Yamamoto, Kazuho Ikeo, and Shunsuke Yaguchi 18. Functional Genomic Studies of Trichoplax adhaerens Neuronal Activity Julia Gauberg, Adriano Senatore, and Andreas Heyland 19. A Bioinformatics Tutorial for Comparative Development Genomics in Diverse Meiofauna Joseph L. Sevigny, Jon L. Norenburg, and Francesca Leasi

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