Transposons and retrotransposons : methods and protocols
著者
書誌事項
Transposons and retrotransposons : methods and protocols
(Methods in molecular biology / John M. Walker, series editor, 1400)(Springer protocols)
Humana Press, c2016
- : hbk
大学図書館所蔵 全1件
  青森
  岩手
  宮城
  秋田
  山形
  福島
  茨城
  栃木
  群馬
  埼玉
  千葉
  東京
  神奈川
  新潟
  富山
  石川
  福井
  山梨
  長野
  岐阜
  静岡
  愛知
  三重
  滋賀
  京都
  大阪
  兵庫
  奈良
  和歌山
  鳥取
  島根
  岡山
  広島
  山口
  徳島
  香川
  愛媛
  高知
  福岡
  佐賀
  長崎
  熊本
  大分
  宮崎
  鹿児島
  沖縄
  韓国
  中国
  タイ
  イギリス
  ドイツ
  スイス
  フランス
  ベルギー
  オランダ
  スウェーデン
  ノルウェー
  アメリカ
注記
Includes bibliographical references and index
内容説明・目次
内容説明
This volume covers the latest protocols designed to identify and characterize TEs in genomes, ancient or recently inserted. Additionally, this book includes a series of protocols designed to understand how host genomes act to regulate the activity of TEs, from elegant genetic mobilization assays to key biochemical methods. Finally, this book also includes chapters that describe how TEs can be used for biotechnological applications. Written for the Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.
Authoritative and practical, Transposons and Retrotransposons: Methods and Protocols aims to ensure successful results in the further study of this vital field.
目次
Study of Transposable Elements and their Genomic Impact.- Bacterial Group II Introns: Identification and Mobility Assay.- In silico Methods to Identify Exapted Transposable Element Families.- Retrotransposon Capture Sequencing (RC-seq): A Targeted, High-Throughput Approach to Resolve Somatic L1 Retrotransposition in Humans.- Long Interspersed Element Sequencing (L1-Seq): A Method to Identify Somatic LINE-1 Insertions in the Human Genome.- Combining Amplification Typing of L1 Active Subfamilies (ATLAS) with High Throughput Sequencing.- RNA-seq Analysis to Measure the Expression of SINE Retroelements.- Qualitative and Quantitative Assays of Transposition and Homologous Recombination of the Retrotransposon Tf1 in Schizosaccharomyces pombe.- LINE Retrotransposition Assays in Saccharomyces cerevisiae.- LINE-1 Cultured Cell Retrotransposition Assay.- L1 Retrotransposition in Neural Progenitor Cells.- Characterization of Engineered L1 Retrotransposition Events: The Recovery Method.- SINE Retrotransposition: Evaluation of Alu Activity and Recovery of de novo Inserts.- The Engineered SVA Trans-Mobilization Assay.- Detection of LINE-1 RNAs by Northern Blot.- Monitoring Long Interspersed Nuclear Element 1 Expression during Mouse Embryonic Stem Cells Differentiation.- Immuno-Detection of Human LINE-1 Expression in Cultured Cells and Human Tissues.- Cellular Localization of Engineered Human LINE-1 RNA and Proteins.- Purification of L1-ribonucleoprotein Particles (L1-RNPs) from Cultured Human Cells.- Characterization of L1-RiboNucleoprotein Particles.- LEAP: L1 Element Amplification Protocol.- Biochemical Approaches to Study LINE-1 Reverse Transcriptase Activity In Vitro.- Methylated DNA Immunoprecipitation Analysis of Mammalian Endogenous Retroviruses.- Profiling DNA Methylation and Hydroxymethylation at Retrotransposable Elements.- A Large-Scale Functional Screen to Identify Epigenetic Repressors of Retrotransposon Expression.- Reprogramming of Human Fibroblasts to Induced Pluripotent Stem Cells with Sleeping Beauty Transposon-based Stable Gene Delivery.
「Nielsen BookData」 より