Molecular evolution : producing the biochemical data

著者

• Zimmer, Elizabeth
• Roalson, Eric H.

書誌事項

Molecular evolution : producing the biochemical data

edited by Elizabeth A. Zimmer ... [et al.]

（Methods in enzymology / editors in chief, Sidney P. Colowick, Nathan O. Kaplan, v. 224, 395）

Academic Press, c1993-

• [pt. A]
• pt. B

注記

Editors of pt. B: Elizabeth A. Zimmer, Eric H. Roalson

Pt. B published by: Amsterdam : Elsevier Academic Press

Includes bibliographical references and indexes

内容説明・目次

巻冊次

[pt. A] ISBN 9780121821258

内容説明

This book provides a single source of information for all molecular methods. Expert advice is given on sample collection and storage for molecular work.

目次

Practical Issues in Performing Comparative Molecular Studies:Y. Suh, J.A. Blake, and M.J. Braun, Equipping and Organizing Comparative Laboratory Molecular Genetics.K.J. Sytsma, T.J. Givnish, J.F. Smith, and W.J. Hahn, Collection and Storage of Land Plant Samples for Macromolecular Comparisons.R.L. Cann, R.A. Feldman, L.A. Freed, J.K. Lum, and C.A. Reeb, Collection and Storage of Vertebrate Samples.M. Dick, D.M. Bridge, W.C. Wheeler, and R. DeSalle, Collection and Storage of Invertebrate Samples.M. Blackwell and R.L. Chapman, Collection and Storage of Fungal and Algal Samples.Comparing Macromolecules: Exploring Biological Diversity: Comparisons at Protein Level:C.J.Bult and Y.-T. Kiang, One-Dimensional Electrophoretic Comparisons of Plant Proteins.J. Britton-Davidian, Starch Gel Electrophoresis in Vertebrates.D. Goldman and S.J. O'Brien, Two-Dimensional Protein Electrophoresis in Phylogenetic Studies.N. Tuross and L. Stathoplos, Ancient Proteins in Fossil Bones.M.H.V. Van Regenmortel, C. Joisson, and C. Wetter, Comparative Immunological Methods.E.M. Prager and A.C. Wilson, Information Content of Immunological Distances.Comparisons at Nucleic Acid Level:D.B. Stein, Isolation and Comparison of Nucleic Acids from Land Plants: Nuclear and Organellar Genes.J.M. Chesnick and R. Cattolico, Isolation of DNA from Eukaryotic Algae.R. DeSalle, A.K. Williams, and M. George, Isolation and Characterization of Animal Mitochondrial DNA.A.L. Rayburn, Comparative Studies of Genome Content. M.A. Batzer, C.W. Schmid, and P.L. Deininger, Evolutionary Analyses of Repetitive DNA Sequences.M.S. Springer and R.J. Britten, DNA-DNA Hybridization of Single-Copy DNA Sequences.S.O. Rogers, G.C. Beaulieu, and A.J. Bendich, Comparative Studies of Gene Copy Numbers.J.L. Slightom, Optimal Preparative Methods for Producing Comparative Gene Libraries.S.H. Rogstad, Surveying Plant Genomes for Variable Number of Tandem Repeat Loci.B.M. Bowditch, D.G. Albright, J. Williams, and M.J. Braun, Use of Randomly Amplified Polymorphic DNA Markers in Comparative Genome Studies.S.L. Martin and H.A. Wichman, Molecular Approaches to Mammalian Retrotransposon Isolation.I. Felger and J.A. Hunt, Detection and Characterization of Transposable Elements.C.P. Kurtzman, DNA-DNA Hybridization Approaches to Species Identification in Small Genome Organisms.J.-P. Bachellerie and L.-H. Qu, Direct Ribosomal-RNA Sequencing for Phylogenetic Studies.J.F. Senecoff and R.B. Meagher, In Vivo Analysis of Plant 18S Ribosomal-RNA Structure.D. Stahl, Comparison of Nucleic Acids from Microorganisms: Sequencing Approaches.W.K. Thomas and T.D. Kocher, Sequencing of Polymerase Chain Reaction-Amplified DNAs.B.H. Bowman and S.R. Palumbi, Rapid Production of Single-Stranded Sequencing Template from Amplified DNA Using Magnetic Beads.W.K. Thomas and S. Paabo, DNA Sequences from Old Tissue Remains.E.P. Lessa, Analysis of DNA Sequence Variation at Population Level by Polymerase Chain Reaction and Denaturing Gradient Gel Electrophoresis.S.-Y. Chang, A. Shih, and S. Kwok, Detection of Variability in Natural Populations of Viruses by Polymerase Chain Reaction.K.E. Holsinger and R.K. Jansen, Phylogenetic Analysis of Restriction Site Data.D.M. Hillis, M.W. Allard, and M.M. Miyamoto, Analysis of DNA Sequence Data: Phylogenetic Inference.Comparing Macromolecules: Exploring Evolutionary Pattern and Process:B. Reinhold-Hurek and D.A. Shub, Experimental Approaches for Detecting Self-Splicing Group I Introns.L.N.W. Kam-Morgan, T.B. Lavoie, S.J. Smith-Gill, and J.F. Kirsch, Site-Directed Mutagensis in Analysis of Protein-Protein Interactions.P.K. Tucker and B. Lundrigan, Comparative Studies of Mammalian Y Chromosome.G.A. Dover, A.R. Linares, and J.M. Hancock, Detectionand Quantification of Concerted Evolution and Molecular Drive.E.R. Jupe and E.A. Zimmer, Assaying Differential Ribosomal RNA Gene Expression with Allele-Specific Probes.D.M. Irwin, Assays for Copy Number, Differential Expression, and Recombination in Lysozyme Multigene Family.G. Wistow, Identification of Lens Crystallins: A Model System for Gene Recruitment.P. Shih, B.A. Malcolm, S. Rosenberg, J.F. Kirsch, and A.C. Wilson, Reconstruction and Testing of Ancestral Proteins.C.-B. Stewart, Comparative Method in Study of Protein Structure and Function: Enzyme Specificity as an Example.B.G. Hall and B. Hauer, Acquisition of New Metabolic Activities by Microbial Populations.D.E. Dykhuizen, Chemostats Used for Studying Natural Selection and Adaptive Evolution.S. Jinks-Robertson and T.D. Petes, Experimental Determination of Rates of Concerted Evolution.A.D. Ellington, Experimental Testing of Theories of an Early RNA World.Author Index.Subject Index.

巻冊次

pt. B ISBN 9780121828004

内容説明

The critically acclaimed laboratory standard, Methods in Enzymology, is one of the most highly respected publications in the field of biochemistry. Since 1955, each volume has been eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. The series contains much material still relevant today - truly an essential publication for researchers in all fields of life sciences. Molecular Evolution Producing the Biochemical Data part B is a continuation of methods published in Part A (1993, volume 224). The work is a very methodological look at markers, templates, genomes, datasets and analyses used in studies of biological diversity.

目次

Isolation of DNA from plants with large amounts of secondary metabolites Nucleic Acid Isolation from Environmental Aqueous Samples Nucleic acid isolation from ecological samples-vertebrate gut flora Nucleic acid isolation from ecological samples - fungal associations, lichens Nucleic acid isolation from ecological samples-fungal associations, mycorrhizae Nucleic acid isolation from ecological samples-animal scat and other associated materials Isolation and analysis of DNA from archaeological, clinical and natural history specimens Isolation and characterization of proteins from archaeological and ancient specimens Animal Phylogenomics: Multiple Interspecific Genome Comparisons ISSR techniques for evolutionary biology Use of Amplified Fragment Length Polymorphism (AFLP) markers in surveys of vertebrate diversity Use of AFLP markers in surveys of arthropod diversity Use of AFLP markers in surveys of plant diversity Isolating microsatellite DNA loci Use of microsatellites for parentage and kinship analyses in animals Use of capillary array electrophoresis single strand conformational polymorphism analysis to estimate genetic diversity of candidate genes in germplasm collections Ribosomal RNA probes and microarrays: Their potential use in assessing microbial biodiversity The role of geographic analyses in locating, understanding and using plant genetic diversity In Situ Hybridization of Phytoplankton Using Fluorescently-Labelled rRNA Probes Sequencing and comparing whole mitochondrial genomes of animals Methods for obtaining and analyzing whole chloroplast genome sequences Construction of Bacterial Artificial Chromosome libraries for use in phylogenetic studies Comparative EST analyses in plant systems Isolation of genes from plant Y chromosomes Preparation of samples for comparative studies of plant chromosomes using in situ hybridization methods Preparation of samples for comparative studies of arthropod chromosomes: visualization, in situ hybridization, and genome size estimation Experimental methods for assaying natural transformation and inferring horizontal gene transfer Use of confocal microscopy in comparative studies of vertebrate morphology PrimerSelect: A transcriptome-wide oligonucleotide primer pair design program for kinetic RT-PCR-based transcript profiling Detecting differential expression of parental or progenitor alleles in genetic hybrids and allopolyploids genome-wide analysis of gene expression changes in polyploids Designing experiments using spotted microarrays to detect gene regulation differences within and among species Methods for studying the evolution of plant reproductive structures: Comparative gene expression techniques Developing antibodies to synthetic peptides based on comparative DNA sequencing of multigene families Application of ancestral protein reconstruction in understanding protein function: GFP-like proteins Advances in phylogeny reconstruction from gene order and content data Analytical methods for detecting paralogy in molecular datasets Analytical methods for studying the evolution of paralogs using duplicate gene data sets Supertree construction in the genomic age Maximum-likelihood methods for phylogeny estimation Context Dependence and Co-Evolution among Amino Acid Resideue in Proteins

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詳細情報

• NII書誌ID(NCID): BA21105565
• ISBN:
  • 0121821250
  • 012182800X
• 出版国コード: us
• タイトル言語コード: eng
• 本文言語コード: eng
• 出版地: San Diego ; Tokyo
• ページ数/冊数: v.
• 大きさ: 24 cm
• 分類:
  • NLM : W1
• 件名:
  • MESH : Evolution
  • MESH : Genetics, Biochemical
  • MESH : Molecular Biology - methods
• 親書誌ID:
  • BA00197543