Computer aided design and DNA assembly

著者

• Voigt, Christopher (Christopher A.)

書誌事項

Computer aided design and DNA assembly

edited by Christopher Voigt

（Methods in enzymology / editors in chief, Sidney P. Colowick, Nathan O. Kaplan, v. 498 . Synthetic Biology ; pt. B）

Elsevier, 2011

注記

Formerly CIP Uk

Includes bibliographical references and indexes

内容説明・目次

内容説明

Synthetic biology encompasses a variety of different approaches, methodologies and disciplines, and many different definitions exist. This Volume of Methods in Enzymology has been split into 2 Parts and covers topics such as Measuring and Engineering Central Dogma Processes, Mathematical and Computational Methods and Next-Generation DNA Assembly and Manipulation.

目次

Voigt / MIE Vol Table of Contents Synthetic biology, Part B Subtitle: Computer Aided Design and DNA Assembly Section I. Mathematical and Computational Methods DNA-binding specificity prediction with FoldX Alejandro D. Nadra, Luis Serrano, Andreu Alibes The Ribosome Binding Site Calculator Howard M. Salis Designing Genes for Successful Protein Expression Mark Welch, Alan Villalobos, Claes Gustafsson and Jeremy Minshull Application of Metabolic Flux Analysis in Metabolic Engineering Sang Yup Lee, Jong Myoung Park and Tae Yong Kim Section II. Grammars, Languages, and Computer-Aided Design Clotho: A Software Platform for the Creation of Synthetic Biological Systems Swapnil Bhatia, Bing Xia, Ben Bubenheim, Maisam Dadgar, Douglas Densmore and J. Christopher Anderson SynBioSS-Aided Design of Synthetic Biological Constructs Yiannis N. Kaznessis The Eugene Language for Synthetic Biology Lesia Bilitchenko, Adam Liu, Douglas Densmore A step by step introduction to rule-based design of synthetic genetic constructs using GenoCAD Mandy L. Wilson, Russell Hertzberg, Laura Adam, Jean Peccoud Methods for open innovation on a genome-design platform associating scientific, commercial, and educational communities in synthetic biology Tetsuro Toyoda Section III. Next-Generation DNA Assembly and Manipulation Recursive construction and error correction of DNA molecules and libraries from synthetic and natural DNA Tuval Ben Yehezkel and Ehud Shapiro Industrial scale gene synthesis Frank Notka, Michael Liss & Ralf Wagner Chemical DNA Synthesis: Methods and Applications Randall A. Hughes, Aleksandr E. Miklos, and Andrew D. Ellington Assembly of BioBrick standard biological parts using three antibiotic assembly Reshma Shetty, Meagan Lizarazo, Randy Rettberg, and Thomas F. Knight, Jr Genetic Assembly Tools for Synthetic Biology Billyana Tsvetanova, Lansha Peng, Xiquan Liang, Ke Li, Jian-Ping Yang, Tony Ho, Josh Shirley, Liewei Xu, Jason Potter, Wieslaw Kudlicki, Todd Peterson, and Federico Katzen Enzymatic assembly of overlapping DNA fragments Daniel G. Gibson Automated assembly of standard biological parts Mariana Leguia, Jennifer Brophy, Douglas Densmore and J. Christopher Anderson MEGAWHOP Cloning: A method of creating random mutagenesis libraries via megaprimer PCR of whole plasmids Kentaro Miyazaki Section III. Genome-scale Engineering Rapid and Multiplexed Genome Engineering and Genotyping Methods: Applications for Synthetic Biology and Protein and Pathway Engineering Harris H. Wang and George M. Church Construction and manipulation of giant DNA by a genome vector Mitsuhiro ITAYA and Kenji TSUGE Mapping E. coli RNA Polymerase and associated transcription factors and identifying promoters genome-wide Sarah E. Davis, Rachel A. Mooney, Elenita I. Kanin, Jeff Grass, Robert Landick and Aseem Z. Ansari

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詳細情報

• NII書誌ID(NCID): BB0628733X
• ISBN:
  • 9780123851208
• 出版国コード: ne
• タイトル言語コード: eng
• 本文言語コード: eng
• 出版地: Amsterdam ; Tokyo
• ページ数/冊数: xlviii, 500 p., [8] p. of plates
• 大きさ: 24 cm
• 分類:
  • DC22 : 610.28
• 件名:
  • LCSH : Synthetic biology
  • LCSH : Bioengineering
• 親書誌ID:
  • BA00197543