PCR primer design

著者

    • Basu, Chhandak

書誌事項

PCR primer design

edited by Chhandak Basu

(Methods in molecular biology / John M. Walker, series editor, 1275)(Springer protocols)

Humana Press, c2015

2nd ed

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注記

Includes bibliographical references and index

内容説明・目次

内容説明

This volume provides an overview on design PCR primers for successful DNA amplification. Chapters focus on primer design strategies for quantitative PCR, in silico PCR primer design, and primer design using software. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and easily accessible, PCR Primer Design, Second Edition seeks to aid molecular biology students, researchers, professors and PCR enthusiasts.

目次

1. Fast Masking Of Repeated Primer Binding Sites In Eukaryotic Genomes Reidar Andreson, Lauris Kaplinski, and Maido Remm 2. Primer Design for PCR Reactions in Forensic Biology Kelly M. Elkins 3. Design of Primers and Probes For Quantitative Real-Time PCR MethodsAlicia Rodriguez, Mar Rodriguez, Juan J. Cordoba, and Maria J. Andrade 4. Large-scale Nucleotide Sequence Alignment And Sequence Variability Assessment To Identify the Evolutionarily Highly Conserved Regions For Universal Screening PCR Assay Design: An Example Of Influenza A VirusNagy Alexander, Jirinec, Tomas, Jirincova, Helena, and Havlickova, Martina 5. Low-concentration Initiator Primers Improve The Amplification Of Gene Targets With High Sequence Variability Kenneth E. Pierce and Lawrence J. Wangh 6. Multiplex PCR Primer Design for Simultaneous Detection of Multiple Pathogens Wenchao Yan 7. Degenerate Primer Design for Highly Variable Genomes Kelvin Li, Susmita Shrivastava, and Timothy B. Stockwell 8. Allele-specific Real Time Polymerase Chain Reaction As A Tool For Urate Transporter 1 Mutation Detection Juliet O. Makanga, Antonius Christianto, and Tetsuya Inazu 9. MultiPLX: Automatic Grouping And Evaluation Of PCR Primers Lauris Kaplinski and Maido Remm 10. In silico PCR Primer Designing and Validation Anil Kumar and Nikita Chordia 11. Primer Design using Primer Express (R) for SYBR Green Based Quantitative PCR Amarjeet Singh and Girdhar K. Pandey 12. Designing Primers for SNaPshot Technique Greiciane Gaburro Paneto and Francisco de Paula Careta 13. Rapid and Simple Method of qPCR Primer Design Brenda Thornton and Chhandak Basu 14. PRIMEGENSw3: A Web-based Tool for High-throughput Primer and Probe Design Garima Kushwaha 15. Selecting Specific PCR Primers with MFEprimerWubin Qu and Chenggang Zhang

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